Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   EPT59_RS06505 Genome accession   NZ_CP035020
Coordinates   1327007..1328284 (+) Length   425 a.a.
NCBI ID   WP_128383406.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain 13_3     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1322007..1333284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EPT59_RS06480 (EPT59_06480) tsf 1322904..1323782 (+) 879 WP_003644498.1 translation elongation factor Ts -
  EPT59_RS06485 (EPT59_06485) pyrH 1323982..1324704 (+) 723 WP_128383405.1 UMP kinase -
  EPT59_RS06490 (EPT59_06490) frr 1324706..1325269 (+) 564 WP_003640736.1 ribosome recycling factor -
  EPT59_RS06495 (EPT59_06495) - 1325389..1326168 (+) 780 WP_003640735.1 isoprenyl transferase -
  EPT59_RS06500 (EPT59_06500) - 1326184..1326969 (+) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  EPT59_RS06505 (EPT59_06505) eeP 1327007..1328284 (+) 1278 WP_128383406.1 RIP metalloprotease RseP Regulator
  EPT59_RS06510 (EPT59_06510) - 1328324..1330033 (+) 1710 WP_045351392.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45913.40 Da        Isoelectric Point: 9.3623

>NTDB_id=333991 EPT59_RS06505 WP_128383406.1 1327007..1328284(+) (eeP) [Lactiplantibacillus plantarum strain 13_3]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWEITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=333991 EPT59_RS06505 WP_128383406.1 1327007..1328284(+) (eeP) [Lactiplantibacillus plantarum strain 13_3]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGCCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGAAATTACCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAATGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATTTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(210-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494

Multiple sequence alignment