Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   FRD49_RS02165 Genome accession   NZ_CP042994
Coordinates   456024..458069 (-) Length   681 a.a.
NCBI ID   WP_148356639.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain J1A     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 451024..463069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FRD49_RS02130 (FRD49_02130) - 451500..452183 (+) 684 WP_002049738.1 outer membrane lipid asymmetry maintenance protein MlaD -
  FRD49_RS02135 (FRD49_02135) - 452210..452851 (+) 642 WP_002049753.1 phospholipid-binding protein MlaC -
  FRD49_RS02140 (FRD49_02140) - 452863..453150 (+) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  FRD49_RS02145 (FRD49_02145) - 453225..454238 (-) 1014 WP_002049699.1 CorA family divalent cation transporter -
  FRD49_RS02150 (FRD49_02150) - 454396..454977 (+) 582 WP_002049746.1 TIGR00730 family Rossman fold protein -
  FRD49_RS02155 (FRD49_02155) - 454992..455393 (+) 402 WP_006582595.1 NUDIX hydrolase -
  FRD49_RS02160 (FRD49_02160) comF 455396..456031 (-) 636 WP_148356638.1 ComF family protein Machinery gene
  FRD49_RS02165 (FRD49_02165) recG 456024..458069 (-) 2046 WP_148356639.1 ATP-dependent DNA helicase RecG Machinery gene
  FRD49_RS02170 (FRD49_02170) - 458090..458905 (+) 816 WP_006580703.1 NAD(P)H-binding protein -
  FRD49_RS02175 (FRD49_02175) adeT2 458985..459971 (+) 987 WP_148356640.1 putative multidrug efflux protein AdeT2 -
  FRD49_RS02180 (FRD49_02180) plsB 460014..462587 (-) 2574 WP_004711794.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76520.15 Da        Isoelectric Point: 7.7108

>NTDB_id=333960 FRD49_RS02165 WP_148356639.1 456024..458069(-) (recG) [Acinetobacter nosocomialis strain J1A]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTLLPKTQLTAIYPSTDGLTQPKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILIDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARTQAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLNRIATNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQSVMQSFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=333960 FRD49_RS02165 WP_148356639.1 456024..458069(-) (recG) [Acinetobacter nosocomialis strain J1A]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTACTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTGGGTGCACGAGGGCTTGAGCTTTATCATCCAGAAATTCAGCTCATTAATGAGCATACGC
TTCTACCCAAAACGCAGCTCACGGCAATTTACCCAAGTACTGATGGTTTAACGCAACCTAAGTTACGTGAATATGTTAAA
CAGGCGTTGAAGCATCATAGTGATGCTCTACCCGAGCTGCTTCCTAAACAATATACAAATGGATACGCACTCAAAGAAGC
CCTACATTACATTCATGAGCCACCTGTCGATGCCAATATGATTCAATTGGCCCAAGGGTCTCATCCTGCTCAGCAACGCC
TTATTTTTGAAGAGTTGGTCGCACATCAAATTAGTCTTCTCACACGACGTGCTTATATTCGTCAAATTGCCTCACCTGCT
TTCCCAAGCAGCAAAGTACTTGCGAAAAAACTGTTAGAAGCTCTTCCCTTTCAAATGACCAACGCACAAAAGCGTGTATC
AAAAGAAATTTTAATCGACTTAAAACAACACCAACCGATGTTACGCTTAGTACAAGGTGATGTAGGTGCAGGTAAAACTT
TAGTTGCAGCAGTTGCTGCATGTCACGCCTTAGAAGCAGATTGGCAAGTTGCCTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAGCGCTGGTTTGAACCTTTAGGTATTACAGTAGCTTGGCTGTCAGGCAAACAAAAAGG
TAAAGCACGAACACAAGCTGAACAACAAATCAAAGAAGGCCATGCCGAGCTTATTGTAGGTACTCATGCTTTGTTTCAAG
ATAATGTTGAGTTTGCCAAACTAGGACTCGTGATTATTGATGAGCAGCACCGCTTTGGGGTGGATCAACGATTAGCCTTA
CGCAACAAAGGCGCAGAACAACTCACACCACATCAACTCGTCATGACTGCAACGCCAATTCCTAGAACATTAGCAATGAG
TGCTTATGGCGATTTGGATACATCGATTATTGATGAATTGCCGCCAGGCCGTACCCCTATCCAGACCGTCACAATTCCGC
TAGATCGTCGTGAAGAAGTGCTAAATCGAATTGCTACAAATTGCCGAGAAGGCAAGCAAGCTTACTGGGTATGCACTCTG
GTTGAACAATCCGAAACTTTAGATGCTCAAGCTGCCGAAGCCACTTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCTGATGAAAAGCAATCTGTCATGCAATCATTTAAAAACAATGAACTACAAC
TGCTAATTGCAACAACTGTTATTGAGGTTGGGGTAGATGTACCTAATGCCTCAATTATGGTCATTGAAAATGCTGAACGC
TTAGGTCTTTCACAACTACATCAATTACGAGGTCGAGTCGGACGAGGTGCAAAGGCTAGTTTTTGTGTTCTTCTCTATAA
ACCCCCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAACGACGGCTTTGTCATTGCTGAAAAAG
ACCTTGAATTACGAGGTCCGGGTGAGTTATTAGGAACAAAACAGACAGGTGATATGGGCTTCCGTGTCGCACGTTTAGAA
CGAGATGATCATTTACTGAGTCAAGCGCATTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGACGCCCT
CTTGAAACGCTGGCTGCCTGAAGCACCTCGATACGCTTATGTTTAA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

RecG wedge domain (RecG_wedge)

(7-163)

DEAD/DEAH box helicase (DEAD)

(262-422)

Helicase conserved C-terminal domain (Helicase_C)

(466-576)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.353

97.651

0.404
  recG/mmsA Streptococcus pneumoniae R36A

41.353

97.651

0.404
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389