Detailed information NTG0333957

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: FRD49_RS01805
• Genome accession: NZ_CP042994
• Coordinates: 382782..383258 (+)
• Length: 158 a.a.
• NCBI ID: WP_039246155.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain J1A
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 377782..388258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FRD49_RS01795 (FRD49_01795)	-	378296..379078 (+)	783	WP_148356613.1	pilus assembly PilX N-terminal domain-containing protein	-
FRD49_RS01800 (FRD49_01800)	-	379094..382768 (+)	3675	WP_148356614.1	PilC/PilY family type IV pilus protein	-
FRD49_RS01805 (FRD49_01805)	comE	382782..383258 (+)	477	WP_039246155.1	type IV pilin protein	Machinery gene
FRD49_RS01810 (FRD49_01810)	comF	383252..383716 (+)	465	WP_148356615.1	type IV pilin protein	Machinery gene
FRD49_RS01815 (FRD49_01815)	rpsP	383864..384115 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
FRD49_RS01820 (FRD49_01820)	rimM	384135..384683 (+)	549	WP_004711694.1	ribosome maturation factor RimM	-
FRD49_RS01825 (FRD49_01825)	trmD	384730..385485 (+)	756	WP_002051760.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
FRD49_RS01830 (FRD49_01830)	rplS	385701..386069 (+)	369	WP_002051668.1	50S ribosomal protein L19	-
FRD49_RS01835 (FRD49_01835)	-	386121..387062 (-)	942	WP_080594638.1	lipase family alpha/beta hydrolase	-
FRD49_RS01840 (FRD49_01840)	-	387177..388211 (-)	1035	WP_148356616.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 17207.73 Da
• Isoelectric Point: 9.8213

>NTDB_id=333957 FRD49_RS01805 WP_039246155.1 382782..383258(+) (comE) [Acinetobacter nosocomialis strain J1A]
MKGKFTYSLGFTLIELMIVVVIVAIFAAVAIPSYQAYVLRADASRAQQQMQQIAVQLSRQKSRNFNYIGLSTGATTPVIL
PVGATGSAIKYRITVRDGDDTTKTLTDPTALGQNWVIRAEASDPNNFTYLFTSNGLRCKNKATSNVTYITCGTGAEPW

Nucleotide

• Length: 477 bp

>NTDB_id=333957 FRD49_RS01805 WP_039246155.1 382782..383258(+) (comE) [Acinetobacter nosocomialis strain J1A]
ATGAAAGGTAAATTCACGTATTCTTTAGGCTTTACTCTTATTGAGCTAATGATCGTAGTCGTGATTGTTGCTATTTTTGC
TGCAGTTGCAATACCTTCATACCAAGCTTATGTTTTAAGAGCGGATGCTTCACGTGCGCAGCAACAAATGCAACAGATCG
CAGTGCAACTCTCACGTCAGAAATCTAGAAATTTTAATTACATAGGTTTATCTACAGGGGCTACAACCCCAGTAATTTTG
CCTGTTGGGGCAACTGGTAGTGCTATTAAATACCGAATAACTGTGCGTGATGGTGACGATACAACGAAAACCTTAACAGA
TCCTACAGCTTTAGGGCAAAACTGGGTGATTCGAGCAGAGGCTTCAGATCCTAATAATTTTACTTATTTGTTTACTAGTA
ACGGATTACGTTGCAAGAATAAAGCCACTAGCAATGTTACTTATATAACTTGTGGCACTGGAGCTGAGCCGTGGTAA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-30)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (32-106)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Acinetobacter baylyi ADP1	44.785	100	0.462
pilY2	Acinetobacter baumannii D1279779	43.75	100	0.443