Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   EMO94_RS06510 Genome accession   NZ_CP035005
Coordinates   1264337..1265323 (-) Length   328 a.a.
NCBI ID   WP_000959279.1    Uniprot ID   A0A2S6DCY7
Organism   Staphylococcus aureus strain PCFH-226     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1259337..1270323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EMO94_RS06485 - 1259597..1259944 (-) 348 WP_001242104.1 hypothetical protein -
  EMO94_RS06490 - 1260130..1260723 (+) 594 WP_000224612.1 CYTH domain-containing protein -
  EMO94_RS06495 - 1260827..1261192 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  EMO94_RS06500 yjbH 1261215..1262021 (+) 807 WP_128382695.1 protease adaptor protein YjbH -
  EMO94_RS06505 pepF 1262481..1264289 (-) 1809 WP_000082727.1 oligoendopeptidase F -
  EMO94_RS06510 coiA 1264337..1265323 (-) 987 WP_000959279.1 competence protein CoiA Machinery gene
  EMO94_RS06515 mecA 1265444..1266163 (-) 720 WP_001217731.1 adaptor protein MecA -
  EMO94_RS06520 spxA 1266534..1266929 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  EMO94_RS06525 trpS 1267224..1268213 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  EMO94_RS06530 - 1268333..1268824 (-) 492 Protein_1209 ABC transporter substrate-binding protein -
  EMO94_RS06535 - 1268841..1269788 (-) 948 WP_000121214.1 IS30-like element ISSau1 family transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38800.32 Da        Isoelectric Point: 9.4277

>NTDB_id=333938 EMO94_RS06510 WP_000959279.1 1264337..1265323(-) (coiA) [Staphylococcus aureus strain PCFH-226]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPISYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=333938 EMO94_RS06510 WP_000959279.1 1264337..1265323(-) (coiA) [Staphylococcus aureus strain PCFH-226]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6DCY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96
  coiA Staphylococcus aureus MW2

96.037

100

0.96

Multiple sequence alignment