Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   SP70585_RS10295 Genome accession   NC_012468
Coordinates   1907108..1908118 (-) Length   336 a.a.
NCBI ID   WP_000990607.1    Uniprot ID   A0A0B7LZL8
Organism   Streptococcus pneumoniae 70585     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1902108..1913118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SP70585_RS10270 (SP70585_2067) - 1903319..1903612 (-) 294 WP_000977365.1 hypothetical protein -
  SP70585_RS10275 (SP70585_2068) - 1903774..1904226 (+) 453 WP_000079148.1 universal stress protein -
  SP70585_RS10280 (SP70585_2069) - 1904261..1905649 (-) 1389 WP_000453137.1 Cof-type HAD-IIB family hydrolase -
  SP70585_RS10285 (SP70585_2070) - 1905715..1906677 (+) 963 WP_001124777.1 asparaginase -
  SP70585_RS10290 (SP70585_2071) - 1906706..1907044 (-) 339 WP_001092039.1 hypothetical protein -
  SP70585_RS10295 (SP70585_2072) ccpA 1907108..1908118 (-) 1011 WP_000990607.1 catabolite control protein A Regulator
  SP70585_RS10300 (SP70585_2073) - 1908543..1909142 (-) 600 WP_000866724.1 response regulator transcription factor -
  SP70585_RS10305 (SP70585_2074) - 1909144..1910241 (-) 1098 WP_000893549.1 sensor histidine kinase -
  SP70585_RS10310 (SP70585_2075) - 1910241..1910978 (-) 738 WP_000832836.1 ABC transporter permease -
  SP70585_RS10315 (SP70585_2076) - 1910980..1911864 (-) 885 WP_000219356.1 ABC transporter ATP-binding protein -
  SP70585_RS10320 (SP70585_2077) - 1911851..1912045 (-) 195 WP_000715301.1 hypothetical protein -
  SP70585_RS10325 (SP70585_2078) - 1912042..1912248 (-) 207 WP_000503440.1 hypothetical protein -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37073.01 Da        Isoelectric Point: 5.3212

>NTDB_id=33334 SP70585_RS10295 WP_000990607.1 1907108..1908118(-) (ccpA) [Streptococcus pneumoniae 70585]
MNADDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
SLAKGIDDIAEMYKYNIVLANSDEDNEKEVSVVNTLFSKQVDGIIYMGYHLTDKIRSEFSRSRTPIVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLAKENERIAFVSGPLVDDINGKVRLVGYKETLKKAGITYSEGLVFESKYSYDDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEDFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERSSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=33334 SP70585_RS10295 WP_000990607.1 1907108..1908118(-) (ccpA) [Streptococcus pneumoniae 70585]
ATGAATGCAGATGATACAGTAACCATTTATGATGTCGCTCGTGAAGCAGGTGTTTCCATGGCGACGGTCAGCCGTGTGGT
CAATGGCAATAAAAATGTAAAAGAGAATACCCGTAAAAAAGTGCTAGAGGTAATTGATCGTTTGGATTATCGTCCAAATG
CAGTTGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTCGTGATTCCAAATATTACCAATGGTTATTTTTCG
AGTTTGGCTAAGGGGATTGATGATATTGCAGAAATGTACAAGTACAATATTGTCCTAGCTAATAGCGATGAAGATAACGA
GAAAGAAGTTTCTGTTGTCAATACCCTCTTTTCAAAGCAGGTAGATGGCATTATCTATATGGGTTATCACTTGACAGATA
AAATTCGCTCAGAATTTTCGCGTTCACGTACTCCGATTGTTCTCGCAGGAACTGTCGATGTTGAGCACCAGTTGCCAAGT
GTCAATATTGACTATAAGCAAGCAACAATTGATGCAGTGAGTTACCTTGCTAAAGAAAATGAGCGTATTGCTTTCGTTAG
CGGTCCGCTAGTGGATGACATCAATGGTAAGGTTCGTTTAGTTGGCTACAAGGAAACCTTGAAAAAAGCAGGAATCACTT
ATAGTGAGGGTTTGGTATTTGAATCTAAATATAGCTATGATGATGGTTACGCTTTAGCAGAGCGTTTGATTTCATCAAAT
GCAACTGCAGCAGTTGTGACAGGTGATGAGTTGGCAGCAGGAGTCTTGAACGGTTTGGCTGATAAGGGTGTTTCTGTGCC
AGAAGATTTTGAAATTATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACAACGATTGCCCAAC
CTCTTTATGACCTTGGTGCCATTAGTATGCGTATGTTGACCAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTAGCTCAACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LZL8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

99.702

100

0.997

  ccpA Streptococcus gordonii str. Challis substr. CH1

87.126

99.405

0.866

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment