Detailed information NTG0332768

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ELZ14_RS22165
• Genome accession: NZ_CP034725
• Coordinates: 4837237..4839483 (-)
• Length: 748 a.a.
• NCBI ID: WP_003204296.1
• Uniprot ID: -
• Organism: Pseudomonas brassicacearum strain 3Re2-7
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4832237..4844483

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ14_RS22130 (ELZ14_22125)	murB	4832619..4833638 (-)	1020	WP_003204282.1	UDP-N-acetylmuramate dehydrogenase	-
ELZ14_RS22135 (ELZ14_22130)	-	4833635..4834099 (-)	465	WP_003204283.1	low molecular weight protein-tyrosine-phosphatase	-
ELZ14_RS22140 (ELZ14_22135)	kdsB	4834099..4834863 (-)	765	WP_003204286.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ELZ14_RS22145 (ELZ14_22140)	-	4834860..4835045 (-)	186	WP_003179363.1	Trm112 family protein	-
ELZ14_RS22150 (ELZ14_22145)	lpxK	4835069..4836079 (-)	1011	WP_003204290.1	tetraacyldisaccharide 4'-kinase	-
ELZ14_RS22155 (ELZ14_22150)	-	4836079..4836507 (-)	429	WP_003204292.1	ExbD/TolR family protein	-
ELZ14_RS22160 (ELZ14_22155)	exbB	4836504..4837139 (-)	636	WP_003204294.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ELZ14_RS22165 (ELZ14_22160)	comA	4837237..4839483 (-)	2247	WP_003204296.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ELZ14_RS22170 (ELZ14_22165)	-	4839628..4840143 (+)	516	WP_003204298.1	DUF2062 domain-containing protein	-
ELZ14_RS22175 (ELZ14_22170)	-	4840230..4841009 (-)	780	WP_003204300.1	ABC transporter permease	-
ELZ14_RS22180 (ELZ14_22175)	-	4841012..4841944 (-)	933	WP_003204301.1	ABC transporter ATP-binding protein	-
ELZ14_RS22185 (ELZ14_22180)	-	4842081..4842704 (-)	624	WP_003204303.1	glutathione S-transferase family protein	-
ELZ14_RS22190 (ELZ14_22185)	-	4842750..4843409 (-)	660	WP_003204305.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 81056.41 Da
• Isoelectric Point: 9.8156

>NTDB_id=332768 ELZ14_RS22165 WP_003204296.1 4837237..4839483(-) (comA) [Pseudomonas brassicacearum strain 3Re2-7]
MRTGLVALALGLLAPIFLPALPPIWLITAMPVLALMVLPFRTYPLGFFLFGLAWACLSAQCALDDRLPIALDGETRWVEG
RVIGLPQQGEGVMRFELADVHSRRTRLPTAMRLAWFGGPPVNSGERWRLAVKLKRPSGLLNPHGFDYAAWLLSRGIGATG
TIKDGHRLQAARGAWRDEVRQALAQVDAHGRSGALAALVLGDGGGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARYGLWPVGLAWLPWACGLAFCAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKQPDPWWAWLLAFVGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVALGLCPLLLIVGLPVSLSGPLVNLLAVPWISLLVLPLAL
LGTALLPVPLMGEGLLWIAGGLLDLLFKGLALVAGRMPAWVPAAVPPWALGIAAFGAFLLLLPKGVPLRVLGWPMVLLMV
FPPQEHLPQGHAEIWQLDVGQGLAVLVRTRRHALLYDAGPRFGEADAGERVVLPTLRKLGVRRLDLMLLSHADADHAGGA
RAVRNGLPTLEVISGDPDALPAELLAGPCDSGRRWEWDGVGFELWRWASAVESNQKSCVLLVEAGGERLLLTGDIDTPAE
RALLDEALAVPIQWLAAPHHGSRSSSSMALLSRLKPHSVLISRGQGNAFGHPHPQVMARYRRSGLAIYDSAEQGAIRLLL
GAFGVPRTEAGHRRYWRDPPAVGPPGQY

Nucleotide

• Length: 2247 bp

>NTDB_id=332768 ELZ14_RS22165 WP_003204296.1 4837237..4839483(-) (comA) [Pseudomonas brassicacearum strain 3Re2-7]
ATGCGCACAGGGTTAGTCGCGCTTGCACTGGGGCTGTTGGCCCCGATTTTTTTGCCGGCACTGCCGCCGATATGGCTGAT
TACAGCCATGCCGGTGCTGGCGCTGATGGTGTTGCCGTTTCGAACCTACCCGCTGGGTTTTTTCCTGTTCGGGCTGGCCT
GGGCCTGCCTGTCGGCGCAGTGTGCGCTGGATGACCGGTTACCCATCGCGCTCGACGGCGAAACCCGCTGGGTCGAGGGT
CGAGTGATCGGTTTGCCGCAACAGGGCGAAGGCGTGATGCGCTTCGAACTGGCCGATGTCCATTCACGCCGTACCCGTCT
GCCGACGGCGATGCGCCTCGCCTGGTTCGGTGGTCCGCCGGTCAACAGCGGCGAACGATGGCGATTGGCGGTGAAGCTCA
AGCGGCCCAGTGGGCTGCTGAACCCGCACGGCTTCGACTATGCCGCCTGGTTGCTGAGCCGCGGCATCGGCGCGACCGGT
ACCATCAAGGATGGCCATCGCCTGCAAGCGGCCCGGGGGGCCTGGCGTGACGAGGTGCGCCAGGCGCTGGCACAGGTCGA
TGCCCACGGCCGCTCCGGTGCGCTGGCGGCTCTGGTGCTGGGCGACGGCGGCGGGCTGAGTCGCGAGGATTGGCAGGTGC
TGCAAGACACCGGCACCGTCCACTTGCTGGTGATCTCCGGGCAACACATCGGCCTGCTCGCCGGCCTGGTGTACCTGTTG
GTGGCCGGCGCGGCGCGTTATGGTCTTTGGCCGGTGGGTCTGGCCTGGTTGCCTTGGGCCTGTGGGCTGGCCTTCTGTGC
CGCCCTGGGCTACGGCTTGCTCGCCGGCTTCGAGGTGCCGGTGCGGCGGGCCTGCGCGATGATCGGCCTGGTGCTGCTGT
GGCGCTTGCGTTTCAAACAGCCAGATCCGTGGTGGGCATGGCTGCTGGCCTTCGTCGGGGTGCTGGTGTTCGACCCGCTT
GCCAGCTTGCGGCCGGGGTTCTGGTTGTCGTTTGCGGCCGTGGCCATATTGATGTTCACCTTTGGCGCTCGCCTGGGGCC
CTGGCGCTGGTGGCAAACCTGGACCCGTGCCCAGTGGCTGGTCGCGCTCGGCCTGTGTCCGTTGTTGTTGATCGTGGGTT
TGCCGGTCAGCCTCAGCGGGCCGTTGGTGAACCTGCTCGCGGTGCCCTGGATCAGCCTGTTGGTATTGCCGCTGGCGCTG
CTTGGCACGGCATTGTTGCCGGTGCCGCTCATGGGCGAAGGCCTGCTGTGGATTGCCGGTGGGCTGCTCGATCTGCTGTT
CAAGGGGCTGGCACTGGTTGCCGGACGAATGCCGGCCTGGGTTCCTGCCGCAGTCCCGCCCTGGGCCTTGGGCATCGCCG
CCTTCGGTGCTTTTTTGCTGCTGTTGCCCAAAGGTGTGCCGCTACGTGTACTGGGGTGGCCGATGGTGTTGCTGATGGTT
TTTCCACCGCAAGAACACCTGCCGCAAGGGCACGCCGAGATCTGGCAACTGGACGTGGGCCAAGGGCTGGCGGTGCTGGT
GCGGACCCGGCGGCACGCCCTGCTTTACGACGCCGGGCCGCGCTTTGGCGAGGCTGACGCGGGCGAGCGGGTCGTCCTGC
CGACCTTGCGCAAACTGGGTGTGCGCCGCTTGGACCTGATGTTGCTCAGCCATGCCGACGCCGATCACGCTGGCGGTGCC
CGCGCCGTGCGCAATGGGCTGCCGACGCTGGAAGTGATCAGCGGCGATCCAGACGCGCTGCCCGCCGAGCTGCTGGCCGG
GCCTTGCGACAGTGGCAGGCGCTGGGAATGGGATGGGGTCGGGTTCGAACTGTGGCGGTGGGCCTCTGCCGTCGAGAGCA
ACCAGAAGTCCTGCGTCTTGCTGGTGGAGGCCGGCGGTGAACGCCTGCTGCTGACCGGCGATATCGACACCCCTGCCGAG
CGCGCCTTGCTCGACGAGGCCCTGGCCGTGCCGATCCAGTGGCTGGCCGCGCCGCATCACGGCAGTCGCAGTTCGTCGTC
GATGGCGTTGCTGTCGCGTCTCAAGCCGCATTCGGTATTGATCTCTCGAGGGCAGGGCAATGCGTTCGGCCACCCTCATC
CCCAGGTGATGGCCCGGTATCGGCGCTCAGGCCTGGCGATCTACGACAGTGCCGAGCAGGGCGCCATTCGTCTGCTACTG
GGGGCTTTCGGGGTGCCGCGCACCGAGGCCGGGCACCGCCGTTATTGGCGTGATCCGCCAGCCGTCGGGCCACCGGGGCA
ATATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-676)

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (23-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.872	95.722	0.592
comA	Ralstonia pseudosolanacearum GMI1000	32.155	100	0.365