Detailed information NTG0033264

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SPP_RS10285
• Genome accession: NC_012467
• Coordinates: 1908590..1908994 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588020.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae P1031
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1903590..1913994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPP_RS10245 (SPP_2078)	rnpA	1904004..1904375 (-)	372	WP_000739246.1	ribonuclease P protein component	-
SPP_RS13780 (SPP_2079)	-	1904392..1904523 (-)	132	WP_000768904.1	hypothetical protein	-
SPP_RS10250 (SPP_2080)	-	1904524..1905714 (-)	1191	WP_000167766.1	acetate kinase	-
SPP_RS10255 (SPP_2081)	comYH	1905765..1906718 (-)	954	WP_000345116.1	class I SAM-dependent methyltransferase	Machinery gene
SPP_RS12415	-	1906779..1907373 (-)	595	Protein_1944	class I SAM-dependent methyltransferase	-
SPP_RS10270 (SPP_2085)	comGG/cglG	1907510..1907923 (-)	414	WP_000265631.1	competence type IV pilus minor pilin ComGG	Machinery gene
SPP_RS10275 (SPP_2086)	comGF/cglF	1907901..1908362 (-)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
SPP_RS10280 (SPP_2087)	comGE/cglE	1908325..1908627 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
SPP_RS10285 (SPP_2088)	comGD/cglD	1908590..1908994 (-)	405	WP_000588020.1	competence type IV pilus minor pilin ComGD	Machinery gene
SPP_RS10290 (SPP_2089)	comGC/cglC	1908987..1909313 (-)	327	WP_000738633.1	comG operon protein ComGC	Machinery gene
SPP_RS10295 (SPP_2090)	comGB/cglB	1909315..1910331 (-)	1017	WP_001844679.1	competence type IV pilus assembly protein ComGB	Machinery gene
SPP_RS10300 (SPP_2091)	comGA/cglA/cilD	1910279..1911220 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
SPP_RS10305 (SPP_2092)	-	1911296..1911661 (-)	366	WP_000286415.1	DUF1033 family protein	-
SPP_RS10310 (SPP_2093)	-	1911812..1912870 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14662.89 Da
• Isoelectric Point: 10.2164

>NTDB_id=33264 SPP_RS10285 WP_000588020.1 1908590..1908994(-) (comGD/cglD) [Streptococcus pneumoniae P1031]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQVPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=33264 SPP_RS10285 WP_000588020.1 1908590..1908994(-) (comGD/cglD) [Streptococcus pneumoniae P1031]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAATTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGTCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478