Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EHW89_RS03255 Genome accession   NZ_CP034543
Coordinates   672974..673777 (+) Length   267 a.a.
NCBI ID   WP_003025145.1    Uniprot ID   A0AAD2T915
Organism   Streptococcus periodonticum strain KCOM 2412     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 667974..678777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHW89_RS03235 (EHW89_03235) - 668953..670266 (+) 1314 WP_126466669.1 glycosyltransferase family 4 protein -
  EHW89_RS03240 (EHW89_03240) - 670293..670634 (+) 342 WP_126466670.1 hypothetical protein -
  EHW89_RS03245 (EHW89_03245) micA 670926..671627 (+) 702 WP_003025150.1 response regulator YycF Regulator
  EHW89_RS03250 (EHW89_03250) micB 671620..672972 (+) 1353 WP_126466671.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EHW89_RS03255 (EHW89_03255) vicX 672974..673777 (+) 804 WP_003025145.1 MBL fold metallo-hydrolase Regulator
  EHW89_RS03260 (EHW89_03260) - 673786..674145 (+) 360 Protein_603 YbaN family protein -
  EHW89_RS03265 (EHW89_03265) rnc 674528..675226 (+) 699 WP_126466672.1 ribonuclease III -
  EHW89_RS03270 (EHW89_03270) smc 675217..678750 (+) 3534 WP_126466673.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29882.83 Da        Isoelectric Point: 6.0342

>NTDB_id=331781 EHW89_RS03255 WP_003025145.1 672974..673777(+) (vicX) [Streptococcus periodonticum strain KCOM 2412]
MSEKGFKYSILASGSTGNCFYLETPKKRLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMVNQL
AQADLAVEHDFHICDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=331781 EHW89_RS03255 WP_003025145.1 672974..673777(+) (vicX) [Streptococcus periodonticum strain KCOM 2412]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTAGCGTCGGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAGGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACTAGCTTATTGAGTGAAATTGATCGTAAACCAGAGGATT
TGGATGCCATTTTGGTAACGCATGAGCATAAGGATCATATCCATGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATTTATGCCAATCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAGATTGATGTCAGTCAGAAGCACATTTTTGA
AATGGGAAAAACCAAGACATTTGGTGATATTGACATTGAAAGTTTTGGGGTCAGTCATGATGCGGTTGCGCCGCAATTTT
ACCGATTGATGAAGGATGATAAGAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCAGGGATTATT
GAAAATGCGGACGGGTATTTGATTGAGTCTAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGTCTGAA
GCAACGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACTATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGTCATCTTAGCAAAGAAAACAATACCAAAGAATTGGCTCATATCACAATGGTCAATCAATTG
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCTCCAGATACGGCGACACCTTTAACAAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

82.022

100

0.82

Multiple sequence alignment