Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   FGL73_RS11085 Genome accession   NZ_CP042408
Coordinates   2281119..2281901 (+) Length   260 a.a.
NCBI ID   WP_038599202.1    Uniprot ID   -
Organism   Lactococcus lactis strain CBA3619     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2276119..2286901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL73_RS11060 (FGL73_11060) vicX 2276142..2276954 (-) 813 WP_038599190.1 MBL fold metallo-hydrolase Regulator
  FGL73_RS11065 (FGL73_11065) vicK 2277125..2278567 (-) 1443 WP_058206000.1 cell wall metabolism sensor histidine kinase WalK Regulator
  FGL73_RS11070 (FGL73_11070) yycF 2278560..2279261 (-) 702 WP_038599193.1 response regulator YycF -
  FGL73_RS11075 (FGL73_11075) tmk 2279439..2280074 (+) 636 WP_038599196.1 dTMP kinase -
  FGL73_RS11080 (FGL73_11080) - 2280207..2281067 (+) 861 WP_038599199.1 DNA polymerase III subunit delta' -
  FGL73_RS11085 (FGL73_11085) yaaT 2281119..2281901 (+) 783 WP_038599202.1 stage 0 sporulation family protein Regulator
  FGL73_RS11090 (FGL73_11090) yabA 2281894..2282220 (+) 327 WP_003131570.1 DNA replication initiation control protein YabA -
  FGL73_RS11095 (FGL73_11095) rsmI 2282220..2283095 (+) 876 WP_038599205.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  FGL73_RS11100 (FGL73_11100) - 2283172..2283363 (-) 192 WP_012897234.1 hypothetical protein -
  FGL73_RS11105 (FGL73_11105) mvk 2283426..2284358 (-) 933 WP_038599208.1 mevalonate kinase -
  FGL73_RS11110 (FGL73_11110) mvaD 2284663..2285619 (+) 957 WP_038599211.1 diphosphomevalonate decarboxylase -
  FGL73_RS11115 (FGL73_11115) - 2285606..2286595 (+) 990 WP_038599214.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29802.33 Da        Isoelectric Point: 6.6374

>NTDB_id=331637 FGL73_RS11085 WP_038599202.1 2281119..2281901(+) (yaaT) [Lactococcus lactis strain CBA3619]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVRKVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=331637 FGL73_RS11085 WP_038599202.1 2281119..2281901(+) (yaaT) [Lactococcus lactis strain CBA3619]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGCTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTAAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAGGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTTGACCAAATGCA
ACTTTTTATTTCGTTTACGGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTCAGAATCA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCGAAAATTCATGGTGGACTTGGACCTTGTGGGCGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTAAACGGTCTTTGTGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACTTCAGAGGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388