Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGL73_RS11060 Genome accession   NZ_CP042408
Coordinates   2276142..2276954 (-) Length   270 a.a.
NCBI ID   WP_038599190.1    Uniprot ID   -
Organism   Lactococcus lactis strain CBA3619     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2271142..2281954
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL73_RS11035 (FGL73_11035) ytpR 2271372..2271998 (+) 627 WP_146978394.1 YtpR family tRNA-binding protein -
  FGL73_RS11040 (FGL73_11040) nox 2272160..2273500 (+) 1341 WP_098393171.1 H2O-forming NADH oxidase -
  FGL73_RS11045 (FGL73_11045) - 2273590..2273979 (+) 390 WP_038599186.1 single-stranded DNA-binding protein -
  FGL73_RS11050 (FGL73_11050) groES 2274099..2274383 (+) 285 WP_003131589.1 co-chaperone GroES -
  FGL73_RS11055 (FGL73_11055) groL 2274470..2276098 (+) 1629 WP_003131585.1 chaperonin GroEL -
  FGL73_RS11060 (FGL73_11060) vicX 2276142..2276954 (-) 813 WP_038599190.1 MBL fold metallo-hydrolase Regulator
  FGL73_RS11065 (FGL73_11065) vicK 2277125..2278567 (-) 1443 WP_058206000.1 cell wall metabolism sensor histidine kinase WalK Regulator
  FGL73_RS11070 (FGL73_11070) yycF 2278560..2279261 (-) 702 WP_038599193.1 response regulator YycF -
  FGL73_RS11075 (FGL73_11075) tmk 2279439..2280074 (+) 636 WP_038599196.1 dTMP kinase -
  FGL73_RS11080 (FGL73_11080) - 2280207..2281067 (+) 861 WP_038599199.1 DNA polymerase III subunit delta' -
  FGL73_RS11085 (FGL73_11085) yaaT 2281119..2281901 (+) 783 WP_038599202.1 stage 0 sporulation family protein Regulator

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30508.35 Da        Isoelectric Point: 5.8494

>NTDB_id=331634 FGL73_RS11060 WP_038599190.1 2276142..2276954(-) (vicX) [Lactococcus lactis strain CBA3619]
MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGI
DLYANEDTWSELDSKNALGKIPVEQKHLFEMGKTMTFGDIDVESFGVSHDAIAPQFYRFMKDNKSFVMLTDTGYVSDRMR
GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFSIHGNKTKRIFLGHLSLNNNIKELAHLTMD
GYLQQHDVDTKKDLKILDTSHEHASQLYDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=331634 FGL73_RS11060 WP_038599190.1 2276142..2276954(-) (vicX) [Lactococcus lactis strain CBA3619]
ATGACTGAACAAAATGGCTTTAAATATTCCATTTTAGCCTCTGGTTCAACAGGAAATTCTTTTTACTTAGAAACTCCAAA
GAAAAAAATTCTTGTTGATGCCGGACTATCTGGAAAAAAAATAGAAAGTTTACTATCAGAAATTGACCGTGATATTCATG
ATATTGATGCTTTATTAATTACCCATGAACATAGTGACCATATCAAAGGGATTGGTGTTTTGGCAAGGAAATATGGTATT
GACCTTTACGCAAATGAAGATACTTGGTCTGAACTAGATAGTAAAAATGCTTTAGGAAAAATCCCTGTTGAACAAAAACA
TCTGTTTGAAATGGGAAAAACAATGACTTTTGGTGATATTGATGTTGAATCTTTTGGCGTGAGTCACGATGCCATCGCAC
CACAATTTTATCGTTTCATGAAAGATAACAAGAGTTTTGTTATGCTAACTGATACAGGTTATGTATCCGATAGAATGCGT
GGAACCATTGAAAATGCGGATGCTTATCTTATGGAATCAAACCATGACATTGAGATACTCCGCATGGGAGCCTATCCTTG
GCGGACAAAGCAACGTATCCTAAGTGACCAAGGCCACTTATCTAATGAGGACGGCGCTGAGGCGGCTTTTAGTATTCATG
GCAATAAGACAAAACGAATTTTTCTAGGGCACTTGAGTTTAAATAATAATATCAAAGAGCTTGCTCATCTTACTATGGAT
GGTTACTTACAACAACATGATGTCGATACTAAAAAGGACTTGAAGATCCTTGATACTAGTCACGAACATGCTAGTCAACT
TTACGATATTTAG

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

68.148

100

0.681

Multiple sequence alignment