Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FGL89_RS07070 Genome accession   NZ_CP042374
Coordinates   1409627..1410652 (+) Length   341 a.a.
NCBI ID   WP_014974671.1    Uniprot ID   K0DDH9
Organism   Leuconostoc carnosum strain CBA3620     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1404627..1415652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL89_RS07040 (FGL89_07040) - 1405703..1405951 (+) 249 WP_014974677.1 acyl carrier protein -
  FGL89_RS07045 (FGL89_07045) - 1406011..1406466 (+) 456 WP_014974676.1 SprT family protein -
  FGL89_RS07050 (FGL89_07050) - 1406510..1407340 (+) 831 WP_014974675.1 Cof-type HAD-IIB family hydrolase -
  FGL89_RS07055 (FGL89_07055) - 1407327..1407557 (+) 231 WP_014974674.1 hypothetical protein -
  FGL89_RS07060 (FGL89_07060) - 1407560..1408291 (+) 732 WP_041773225.1 CPBP family intramembrane glutamic endopeptidase -
  FGL89_RS07065 (FGL89_07065) - 1408322..1409419 (-) 1098 WP_014974672.1 M24 family metallopeptidase -
  FGL89_RS07070 (FGL89_07070) ccpA 1409627..1410652 (+) 1026 WP_014974671.1 catabolite control protein A Regulator
  FGL89_RS07075 (FGL89_07075) - 1410781..1412652 (+) 1872 WP_014974670.1 acyltransferase family protein -
  FGL89_RS07080 (FGL89_07080) - 1412761..1414110 (+) 1350 WP_014974669.1 MFS transporter -
  FGL89_RS07085 (FGL89_07085) budA 1414200..1414919 (+) 720 WP_014974668.1 acetolactate decarboxylase -
  FGL89_RS07090 (FGL89_07090) udk 1414919..1415548 (+) 630 WP_014974667.1 uridine kinase -

Sequence


Protein


Download         Length: 341 a.a.        Molecular weight: 37442.57 Da        Isoelectric Point: 4.9136

>NTDB_id=331545 FGL89_RS07070 WP_014974671.1 1409627..1410652(+) (ccpA) [Leuconostoc carnosum strain CBA3620]
MQKKSSATIYDVANRVGVSLATVSRVVNGNSNVRESTKRKVLDAIEELGYHPNAVARGLASKKTTTIGVVMPDVTDMYYS
ELARGIDDVANMYHYDVLLTNTDEDPVRETMAVNNLASKQVDGIIFMGNELDNEIINTIIGVDAPVVLAGSVDEAGKLPS
VNINYIDAVKEATEAIIKNGHTRVALVTGPMTHAINRLHRLVGYKAALEEAGLEFDESLLFSAHQDYASGLQIAEKLFLA
EASAAVTYDDEIALGIMNYMREHGKRIPEDFEIITANDTKFTIITRPQLTSIGQPKYDIGAVAMRMLTKLMNNEVIEETQ
VQLPHSLERRGTTINPNHVIQ

Nucleotide


Download         Length: 1026 bp        

>NTDB_id=331545 FGL89_RS07070 WP_014974671.1 1409627..1410652(+) (ccpA) [Leuconostoc carnosum strain CBA3620]
ATGCAAAAAAAAAGCTCAGCAACAATTTATGATGTCGCTAATCGTGTCGGTGTTTCGTTAGCAACAGTATCACGTGTCGT
TAATGGGAATAGCAATGTTCGTGAATCAACGAAACGTAAGGTGTTAGATGCTATTGAAGAGTTAGGTTATCATCCTAACG
CTGTAGCCCGTGGCTTGGCATCAAAGAAAACGACGACAATTGGTGTCGTCATGCCAGATGTGACAGATATGTACTACTCG
GAATTAGCTCGTGGTATTGACGATGTTGCCAATATGTATCACTATGATGTTTTACTTACAAATACGGATGAAGATCCAGT
ACGTGAAACCATGGCTGTGAATAATTTGGCCAGTAAACAAGTCGATGGCATTATTTTTATGGGTAATGAGTTGGATAATG
AAATAATTAATACCATTATTGGTGTTGATGCGCCTGTAGTATTGGCTGGTTCAGTCGATGAAGCAGGTAAATTACCAAGT
GTCAATATTAATTATATTGACGCTGTGAAGGAAGCAACTGAAGCAATTATCAAAAATGGTCATACTCGTGTGGCACTGGT
TACTGGACCCATGACACATGCGATTAACCGTTTACACCGATTAGTGGGGTACAAGGCAGCCTTAGAAGAAGCAGGACTGG
AATTTGATGAGAGCCTATTATTTTCGGCACATCAAGATTATGCTTCAGGGTTACAAATAGCTGAGAAACTGTTTTTGGCT
GAGGCTTCAGCAGCTGTGACATATGATGATGAAATTGCGCTTGGTATTATGAATTACATGCGAGAACACGGCAAACGGAT
ACCCGAGGATTTCGAAATTATTACAGCTAACGACACGAAGTTTACGATTATTACGCGTCCACAATTGACATCAATTGGGC
AACCTAAGTATGATATTGGAGCAGTTGCCATGCGTATGTTAACGAAACTCATGAATAATGAGGTAATTGAAGAAACACAA
GTACAATTACCACATTCCTTAGAACGACGAGGTACCACAATTAATCCGAACCACGTCATACAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB K0DDH9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

51.351

97.654

0.501

  ccpA Streptococcus gordonii str. Challis substr. CH1

50.15

97.654

0.49

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

47.576

96.774

0.46


Multiple sequence alignment