Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EJF26_RS02285 Genome accession   NZ_CP034442
Coordinates   426355..427164 (+) Length   269 a.a.
NCBI ID   WP_001289489.1    Uniprot ID   -
Organism   Streptococcus oralis subsp. dentisani strain F0392     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 421355..432164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJF26_RS02265 pta 422008..422982 (+) 975 WP_000451594.1 phosphate acetyltransferase -
  EJF26_RS02270 mutY 423069..424247 (+) 1179 WP_000886162.1 A/G-specific adenine glycosylase -
  EJF26_RS02275 micA 424304..425011 (+) 708 WP_000723164.1 response regulator YycF Regulator
  EJF26_RS02280 micB 425004..426353 (+) 1350 WP_000568724.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EJF26_RS02285 vicX 426355..427164 (+) 810 WP_001289489.1 MBL fold metallo-hydrolase Regulator
  EJF26_RS02290 - 427196..427543 (-) 348 WP_001071322.1 thiol reductase thioredoxin -
  EJF26_RS02295 - 427654..429372 (-) 1719 WP_000222140.1 phospho-sugar mutase -
  EJF26_RS02300 - 429527..431428 (+) 1902 WP_000584901.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29933.96 Da        Isoelectric Point: 6.3420

>NTDB_id=331337 EJF26_RS02285 WP_001289489.1 426355..427164(+) (vicX) [Streptococcus oralis subsp. dentisani strain F0392]
MSEIGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVNSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=331337 EJF26_RS02285 WP_001289489.1 426355..427164(+) (vicX) [Streptococcus oralis subsp. dentisani strain F0392]
ATGAGTGAAATAGGCTTTAAATATAGTATTTTAGCATCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAAATATTAGTGGATGCAGGCTTGTCAGGTAAGAAAATTACCAGTCTCTTGAGTGAAATCAATCGCAAGCCAGAGGATT
TGGATGCGATTTTGATTACACATGAGCATTCCGACCATATTCATGGAGTCGGTGTGTTGGCTCGAAAGTATGGTATGGAT
CTTTATGCCAATGAAAAAACCTGGCAGGCTATGGAAAATAGCAAGTACCTCGGCAAGGTGAATTCATCGCAGAAGCATAT
CTTTGAGATGGGCAAAACAAAAACCTTTGGCGATATCGATATTGAGAGTTTTGGTGTTAGCCATGATGCAGTCGCACCGC
AGTTCTATCGCTTTATGAAGGATGATAAGAGTTTTGTCATGCTGACCGATACAGGTTATGTCAGCGACCGTATGGCAGGA
ATTGTCGAGAATGCTGACGGTTACCTCATTGAGTCCAACCATGATGTGGAGATCTTGCGAGCAGGTTCTTATGCTTGGCG
ACTCAAACAGCGAATCTTATCTGATCTTGGTCACCTCTCTAACGAAGACGGTGCTGAGGCCATGATTCGTGCAATGGGAA
ATCGGACCAAGAAAATCTACCTTGGGCATTTGTCCAAAGAAAACAATATCAAGGAGCTGGCTCATATGACCATGGTCAAT
CAGCTAGCACAAGCTGATCTGGGAGTAGGAGTAGACTTTAAAGTTTACGATACTTCCCCAGATACCGCAACACCACTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment