Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | EJJ14_RS05830 | Genome accession | NZ_CP034393 |
| Coordinates | 1103789..1104091 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain CLB104 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1098789..1109091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJJ14_RS05805 (EJJ14_05805) | rpsR | 1099152..1099412 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| EJJ14_RS05810 (EJJ14_05810) | lon | 1099472..1101847 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| EJJ14_RS05815 (EJJ14_05815) | - | 1101864..1102511 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| EJJ14_RS05820 (EJJ14_05820) | fliW | 1102672..1103061 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| EJJ14_RS05825 (EJJ14_05825) | proC | 1103061..1103792 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| EJJ14_RS05830 (EJJ14_05830) | ctsT | 1103789..1104091 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| EJJ14_RS05835 (EJJ14_05835) | - | 1104088..1104750 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| EJJ14_RS05840 (EJJ14_05840) | - | 1104747..1105199 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| EJJ14_RS05845 (EJJ14_05845) | hemD | 1105196..1105825 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| EJJ14_RS05850 (EJJ14_05850) | thiE | 1105803..1106435 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| EJJ14_RS05855 (EJJ14_05855) | thiD | 1106425..1107237 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EJJ14_RS05860 (EJJ14_05860) | - | 1107234..1107920 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| EJJ14_RS05865 (EJJ14_05865) | - | 1107917..1108678 (-) | 762 | WP_002867190.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=331050 EJJ14_RS05830 WP_002853046.1 1103789..1104091(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain CLB104]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=331050 EJJ14_RS05830 WP_002853046.1 1103789..1104091(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain CLB104]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |