Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   FQB22_RS03115 Genome accession   NZ_CP042252
Coordinates   585086..585967 (-) Length   293 a.a.
NCBI ID   WP_003184856.1    Uniprot ID   -
Organism   Bacillus licheniformis strain KNU11     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 580086..590967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQB22_RS03080 - 580295..580771 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  FQB22_RS03085 - 580771..581055 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  FQB22_RS03090 mnhG 581039..581413 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  FQB22_RS03095 - 581453..581842 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  FQB22_RS03100 comA 581859..582497 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  FQB22_RS03105 comP 582584..584890 (-) 2307 WP_003184851.1 ATP-binding protein Regulator
  FQB22_RS03110 comX 584913..585077 (-) 165 WP_003184853.1 competence pheromone ComX -
  FQB22_RS03115 comQ 585086..585967 (-) 882 WP_003184856.1 polyprenyl synthetase family protein Regulator
  FQB22_RS03120 degQ 586156..586296 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  FQB22_RS03130 - 586815..587129 (+) 315 WP_231105283.1 SDR family oxidoreductase -
  FQB22_RS03135 - 587172..588392 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  FQB22_RS03140 - 588571..590040 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  FQB22_RS03145 - 590058..590609 (-) 552 WP_003184868.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33459.20 Da        Isoelectric Point: 4.6798

>NTDB_id=330657 FQB22_RS03115 WP_003184856.1 585086..585967(-) (comQ) [Bacillus licheniformis strain KNU11]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSNDSCFFNKMMEYILQSSQGQHDDLSDKPVTENECLDMIKRKSGSLTALSCVLGT
MLATGKFNPTVESYALQLGIALQIENDYRGLFYNSKSDIVKNKRTLAYLYLKRKFNQSSIDLLKVFENEDKIADIEIKCY
KEKLKEAGVPQYMYVMIQLAIQKFRRGIAELELKQEEKKWLASFLLNKFDKED

Nucleotide


Download         Length: 882 bp        

>NTDB_id=330657 FQB22_RS03115 WP_003184856.1 585086..585967(-) (comQ) [Bacillus licheniformis strain KNU11]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
CGATTCTTGCTTTTTTAATAAAATGATGGAATACATATTGCAATCTTCACAAGGGCAACATGATGATCTTAGTGATAAGC
CGGTTACGGAAAACGAATGCCTTGATATGATCAAGCGCAAATCTGGTTCATTGACAGCTCTTTCATGTGTTTTGGGAACC
ATGCTCGCTACAGGTAAATTTAATCCTACTGTTGAATCTTATGCACTCCAATTGGGCATTGCTTTACAGATCGAAAATGA
TTATAGAGGTCTTTTCTATAATTCAAAAAGCGATATTGTGAAAAATAAGCGAACACTTGCTTATTTATACTTGAAAAGAA
AATTTAATCAATCCTCAATTGATTTATTAAAAGTATTTGAAAATGAGGATAAAATTGCCGATATAGAAATAAAATGTTAT
AAAGAAAAATTGAAGGAAGCTGGTGTTCCCCAATATATGTATGTCATGATTCAGCTTGCTATTCAGAAATTTAGAAGAGG
AATAGCTGAGTTAGAGCTGAAACAAGAGGAAAAGAAATGGCTTGCTTCTTTCCTTTTGAACAAGTTTGATAAGGAGGATT
AA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(41-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.637

98.635

0.44