Detailed information NTG0330656

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DNK17_RS04125
• Genome accession: NZ_CP034315
• Coordinates: 757814..758746 (+)
• Length: 310 a.a.
• NCBI ID: WP_000138506.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain TFJ0901
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 752814..763746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DNK17_RS04105 (DNK17_04105)	-	753026..754681 (+)	1656	WP_001118761.1	peptide ABC transporter substrate-binding protein	-
DNK17_RS04110 (DNK17_04110)	-	754800..755714 (+)	915	WP_000598965.1	ABC transporter permease	-
DNK17_RS04115 (DNK17_04115)	-	755724..756755 (+)	1032	WP_000764052.1	ABC transporter permease	-
DNK17_RS04120 (DNK17_04120)	oppD	756768..757814 (+)	1047	WP_000410286.1	ABC transporter ATP-binding protein	Regulator
DNK17_RS04125 (DNK17_04125)	amiF	757814..758746 (+)	933	WP_000138506.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34855.67 Da
• Isoelectric Point: 6.7314

>NTDB_id=330656 DNK17_RS04125 WP_000138506.1 757814..758746(+) (amiF) [Streptococcus agalactiae strain TFJ0901]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNNPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTPQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=330656 DNK17_RS04125 WP_000138506.1 757814..758746(+) (amiF) [Streptococcus agalactiae strain TFJ0901]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGAGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGATATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGGAAACTGTTAGAAGTTGGAACATCTGATGAT
GTTTATAACAATCCAATCCACCCTTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACCCCTGGTCATT
TTGTTTTATCTACACCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.545	99.355	0.542
amiF	Streptococcus thermophilus LMG 18311	54.221	99.355	0.539
amiF	Streptococcus salivarius strain HSISS4	54.426	98.387	0.535