Detailed information NTG0330628

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D8X56_RS01740
• Genome accession: NZ_CP034314
• Coordinates: 338976..339776 (+)
• Length: 266 a.a.
• NCBI ID: WP_108564882.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain HP42K
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 333976..344776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D8X56_RS01705 (D8X56_01705)	pseH	334477..335019 (+)	543	WP_125301610.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
D8X56_RS01710 (D8X56_01710)	-	334952..335890 (-)	939	WP_125301612.1	tetraacyldisaccharide 4'-kinase	-
D8X56_RS01715 (D8X56_01715)	-	335887..336669 (-)	783	WP_125301615.1	NAD+ synthase	-
D8X56_RS01725 (D8X56_01725)	ilvC	336917..337909 (+)	993	WP_125301617.1	ketol-acid reductoisomerase	-
D8X56_RS01730 (D8X56_01730)	minD	337933..338739 (+)	807	WP_001019048.1	septum site-determining protein MinD	-
D8X56_RS01735 (D8X56_01735)	minE	338736..338969 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
D8X56_RS01740 (D8X56_01740)	dprA	338976..339776 (+)	801	WP_108564882.1	DNA-processing protein DprA	Machinery gene
D8X56_RS01745 (D8X56_01745)	dprB	339773..340177 (+)	405	WP_125301619.1	Holliday junction resolvase RuvX	Machinery gene
D8X56_RS01750 (D8X56_01750)	-	340308..340775 (+)	468	WP_206426570.1	tetratricopeptide repeat protein	-
D8X56_RS01755 (D8X56_01755)	-	340963..341301 (+)	339	WP_125301623.1	hypothetical protein	-
D8X56_RS01760 (D8X56_01760)	-	341285..341845 (+)	561	WP_125301625.1	hypothetical protein	-
D8X56_RS01765 (D8X56_01765)	-	341935..342816 (-)	882	WP_125301627.1	RluA family pseudouridine synthase	-
D8X56_RS01770 (D8X56_01770)	recJ	342816..344366 (-)	1551	WP_125301629.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29843.67 Da
• Isoelectric Point: 7.2879

>NTDB_id=330628 D8X56_RS01740 WP_108564882.1 338976..339776(+) (dprA) [Helicobacter pylori strain HP42K]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=330628 D8X56_RS01740 WP_108564882.1 338976..339776(+) (dprA) [Helicobacter pylori strain HP42K]
ATGAAAAGTAATTTCCAATACAGCGCACTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTGGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTAATTATCCCTCAAGCGGATTTACAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCTTGAACGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGCGCGAAAAACCCAAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41