Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   FQU84_RS03720 Genome accession   NZ_CP042250
Coordinates   400714..401346 (-) Length   210 a.a.
NCBI ID   WP_000242755.1    Uniprot ID   A0A1C4FZU4
Organism   Escherichia coli strain BCE049     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 395714..406346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQU84_RS03695 (FQU84_03695) yhfG 395846..396013 (+) 168 WP_000736858.1 YhfG family protein -
  FQU84_RS03700 (FQU84_03700) fic 396003..396605 (+) 603 WP_001280656.1 putative adenosine monophosphate-protein transferase Fic -
  FQU84_RS03705 (FQU84_03705) pabA 396637..397200 (+) 564 WP_000601853.1 aminodeoxychorismate synthase component 2 -
  FQU84_RS03710 (FQU84_03710) argD 397286..398506 (+) 1221 WP_000963803.1 bifunctional acetylornithine/succinyldiaminopimelate transaminase -
  FQU84_RS03715 (FQU84_03715) yhfK 398573..400663 (-) 2091 WP_001304921.1 YccS/YhfK family putative transporter -
  FQU84_RS03720 (FQU84_03720) crp 400714..401346 (-) 633 WP_000242755.1 cAMP-activated global transcriptional regulator CRP Regulator
  FQU84_RS03725 (FQU84_03725) yhfA 401648..402052 (+) 405 WP_001148908.1 OsmC family protein -
  FQU84_RS03730 (FQU84_03730) prkB 402107..402976 (-) 870 WP_001274684.1 phosphoribulokinase -
  FQU84_RS03735 (FQU84_03735) yheU 403030..403248 (-) 219 WP_000907086.1 YheU family protein -
  FQU84_RS03740 (FQU84_03740) yheT 403242..404264 (-) 1023 WP_000057415.1 hydrolase -
  FQU84_RS03745 (FQU84_03745) yheS 404264..406177 (-) 1914 WP_061336487.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 23640.43 Da        Isoelectric Point: 8.2710

>NTDB_id=330560 FQU84_RS03720 WP_000242755.1 400714..401346(-) (crp) [Escherichia coli strain BCE049]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEG
QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR

Nucleotide


Download         Length: 633 bp        

>NTDB_id=330560 FQU84_RS03720 WP_000242755.1 400714..401346(-) (crp) [Escherichia coli strain BCE049]
ATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAA
GAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAG
ACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGC
CAGGAACGTAGCGCATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGAT
TCAGGTAAACCCGGACATTCTGATGCGTCTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCA
ACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCGGATGCTATGACTCAC
CCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATCGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCAT
TCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAA

Domains

Predicted by InterProScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(23-109)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(142-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1C4FZU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Vibrio cholerae strain A1552

95.714

100

0.957
  crp Haemophilus influenzae Rd KW20

77.941

97.143

0.757
  crp Acinetobacter baumannii D1279779

47.343

98.571

0.467