Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   FP480_RS08530 Genome accession   NZ_CP042003
Coordinates   1736167..1738227 (-) Length   686 a.a.
NCBI ID   WP_001151513.1    Uniprot ID   -
Organism   Staphylococcus aureus strain B3-14B     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1731167..1743227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP480_RS08505 (FP480_08505) - 1731991..1732224 (-) 234 WP_000426914.1 acyl carrier protein -
  FP480_RS08510 (FP480_08510) fabG 1732755..1733489 (-) 735 WP_000167269.1 3-oxoacyl-[acyl-carrier-protein] reductase -
  FP480_RS08515 (FP480_08515) fabD 1733482..1734408 (-) 927 WP_000047357.1 ACP S-malonyltransferase -
  FP480_RS08520 (FP480_08520) plsX 1734401..1735387 (-) 987 WP_000239748.1 phosphate acyltransferase PlsX -
  FP480_RS08525 (FP480_08525) fapR 1735392..1735964 (-) 573 WP_001548538.1 transcription factor FapR -
  FP480_RS08530 (FP480_08530) recG 1736167..1738227 (-) 2061 WP_001151513.1 ATP-dependent DNA helicase RecG Machinery gene
  FP480_RS08535 (FP480_08535) fakA 1738417..1740063 (-) 1647 WP_000623896.1 fatty acid kinase catalytic subunit FakA -
  FP480_RS08540 (FP480_08540) - 1740078..1740452 (-) 375 WP_000171418.1 Asp23/Gls24 family envelope stress response protein -
  FP480_RS08545 (FP480_08545) rpmB 1740895..1741083 (+) 189 WP_000517908.1 50S ribosomal protein L28 -
  FP480_RS08550 (FP480_08550) - 1741464..1742105 (-) 642 WP_000547904.1 thiamine diphosphokinase -
  FP480_RS08555 (FP480_08555) rpe 1742112..1742756 (-) 645 WP_000164332.1 ribulose-phosphate 3-epimerase -

Sequence


Protein


Download         Length: 686 a.a.        Molecular weight: 78119.67 Da        Isoelectric Point: 6.3377

>NTDB_id=329944 FP480_RS08530 WP_001151513.1 1736167..1738227(-) (recG) [Staphylococcus aureus strain B3-14B]
MAKVNLIESPYSLLQLKGIGPKKIEVLQQLNIHTVEDLVLYLPTRYEDNTVIDLNQAEDQSNVTIEGQVYTAPVVAFFGR
NKSKLTVHLMVNNIAVKCIFFNQPYLKKKIELNQTITVKGKWNRVKQEITGNRVFFSSQGTQTQENADVQLEPVYRIKEG
IKQKQIRDQIRQALNDVTIHEWLTDGLREKYKLETLDFTLNTLHHPKSKEGLLRARRTYAFTELFLFELRMQWLNRLEKS
SDEAIEIDYDLDQVKSFIDRLPFELTEAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMV
PTEILAEQHAESLIALFGDSMNVALLTGSVKGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITDEQHRFGVN
QRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQYDKVLMQMTSELKKGRQAYVIC
PLIESSEHLEDVQNVVALYESLQQNYGVSRVGLLHGKLSADEKDEVMQKFSNHEIDVLVSTTVVEVGVNVPNATFMMIYD
ADRFGLSTLHQLRGRVGRSDQQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVAN
LVEDYRMLEVARDEAAELIQSGVFFENTYQHLRHFVEENLLHRSFD

Nucleotide


Download         Length: 2061 bp        

>NTDB_id=329944 FP480_RS08530 WP_001151513.1 1736167..1738227(-) (recG) [Staphylococcus aureus strain B3-14B]
TTGGCGAAAGTAAACTTAATAGAAAGTCCATATTCTCTTTTACAATTAAAAGGTATAGGTCCTAAGAAAATAGAAGTATT
GCAACAACTAAATATTCATACAGTGGAAGATCTTGTTCTTTATTTGCCAACTAGATATGAAGATAATACAGTGATTGATT
TGAATCAAGCAGAAGATCAATCTAACGTTACGATAGAAGGACAAGTATATACAGCTCCAGTTGTTGCATTTTTTGGAAGA
AATAAATCAAAATTAACTGTTCATTTAATGGTAAATAATATTGCTGTCAAATGTATTTTTTTCAATCAACCGTATTTAAA
AAAGAAAATCGAATTAAATCAAACTATAACTGTTAAAGGTAAGTGGAATAGGGTTAAACAGGAAATTACTGGTAATAGGG
TTTTCTTTAGTTCGCAAGGTACACAAACTCAAGAAAACGCAGATGTTCAATTAGAACCAGTCTATCGTATTAAGGAAGGT
ATTAAACAAAAGCAAATACGAGACCAAATTAGACAAGCGTTAAATGATGTGACAATTCATGAATGGTTAACTGATGGACT
AAGAGAAAAATATAAATTAGAGACCTTGGACTTTACTTTGAACACATTACATCATCCTAAAAGTAAAGAGGGTTTATTAC
GTGCTCGTAGAACCTATGCATTTACTGAACTGTTTTTATTCGAATTACGTATGCAATGGCTAAATAGATTAGAAAAGTCA
TCTGACGAAGCAATTGAAATTGATTATGACTTAGACCAAGTTAAATCATTTATTGATCGTTTACCTTTTGAACTAACTGA
AGCACAGAAATCCAGTGTTAATGAAATTTTTAGAGATTTAAAAGCACCTATACGTATGCATCGATTACTTCAAGGTGATG
TAGGTTCAGGAAAAACAGTTGTTGCTGCAATTTGTATGTATGCGTTAAAAACGGCTGGTTATCAATCAGCATTGATGGTA
CCAACTGAAATTTTAGCAGAGCAACATGCTGAAAGTTTAATTGCTTTATTTGGAGATTCTATGAACGTTGCGTTGTTAAC
TGGGTCAGTAAAAGGTAAGAAACGAAAAATACTTTTAGAACAACTTGAAAATGGTACGATTGATTGTTTAATTGGAACCC
ATGCATTGATTCAAGATGATGTGATTTTCCATAATGTTGGTTTAGTAATTACAGATGAACAACATCGATTTGGTGTGAAT
CAACGCCAGCTTTTAAGAGAAAAAGGTGCAATGACGAATGTGTTATTTATGACAGCAACCCCGATACCAAGAACACTAGC
AATATCAGTTTTTGGTGAGATGGATGTGTCTTCAATTAAACAATTACCAAAAGGTCGTAAACCTATCATTACTACTTGGG
CAAAGCATGAGCAATACGATAAAGTTTTGATGCAAATGACCTCAGAGTTGAAAAAAGGTCGTCAAGCATATGTCATTTGC
CCGCTTATAGAAAGTTCTGAGCATCTCGAAGATGTTCAAAATGTTGTCGCATTGTACGAGTCTTTACAACAGAATTATGG
TGTTTCCCGTGTAGGGTTATTGCATGGTAAGTTATCTGCCGATGAAAAAGATGAAGTTATGCAAAAGTTTAGCAATCATG
AGATAGATGTTTTAGTTTCTACTACTGTTGTTGAAGTAGGTGTTAATGTACCGAATGCAACTTTTATGATGATTTATGAT
GCGGATCGCTTTGGATTATCAACTTTACATCAGTTACGCGGTCGTGTAGGTAGAAGTGACCAGCAAAGTTACTGTGTTTT
AATTGCATCCCCTAAAACAGAAACAGGAATTGAAAGAATGACAATTATGACACAAACAACGGATGGATTTGAATTGAGTG
AACGAGACTTAGAAATGCGTGGTCCTGGAGATTTCTTTGGTGTTAAACAAAGTGGATTGCCAGATTTCTTAGTTGCCAAT
TTAGTTGAAGATTATCGTATGTTAGAAGTTGCTCGTGATGAAGCAGCTGAACTTATTCAATCTGGCGTATTCTTTGAAAA
TACGTATCAACATTTACGTCATTTTGTTGAAGAAAATTTATTACATCGTAGTTTTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Bacillus subtilis subsp. subtilis str. 168

53.073

97.23

0.516

  recG/mmsA Streptococcus pneumoniae R6

50.388

94.023

0.474

  recG/mmsA Streptococcus pneumoniae R36A

50.388

94.023

0.474

  recG Neisseria meningitidis strain C311

40

97.668

0.391


Multiple sequence alignment