Detailed information NTG0329828

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: EBA29_RS16855
• Genome accession: NZ_CP034203
• Coordinates: 3446989..3448152 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain 83
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3441989..3453152

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EBA29_RS16825 (EBA29_03451)	-	3442254..3442673 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
EBA29_RS16830 (EBA29_03452)	comFC	3442747..3443436 (-)	690	WP_206647877.1	phosphoribosyltransferase family protein	Machinery gene
EBA29_RS16835 (EBA29_03453)	-	3443442..3443726 (-)	285	WP_022553866.1	competence protein ComFB	-
EBA29_RS16840 (EBA29_03454)	comFA	3443784..3445169 (-)	1386	WP_128496920.1	DEAD/DEAH box helicase	Machinery gene
EBA29_RS16845 (EBA29_03455)	-	3445277..3446125 (-)	849	WP_003151387.1	DegV family protein	-
EBA29_RS16850 (EBA29_03456)	degU	3446223..3446912 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
EBA29_RS16855 (EBA29_03457)	degS	3446989..3448152 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
EBA29_RS16860 (EBA29_03458)	-	3448375..3449022 (+)	648	WP_007614107.1	YigZ family protein	-
EBA29_RS16865 (EBA29_03459)	-	3449027..3450241 (+)	1215	WP_014419013.1	LCP family protein	-
EBA29_RS16870 (EBA29_03460)	-	3450331..3451407 (-)	1077	WP_128496922.1	MraY family glycosyltransferase	-
EBA29_RS16875 (EBA29_03461)	-	3451540..3452736 (-)	1197	WP_128496924.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=329828 EBA29_RS16855 WP_007407484.1 3446989..3448152(-) (degS) [Bacillus velezensis strain 83]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=329828 EBA29_RS16855 WP_007407484.1 3446989..3448152(-) (degS) [Bacillus velezensis strain 83]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGTCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCTGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951