Detailed information NTG0032971

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: BAMF_RS30050
• Genome accession: NC_014551
• Coordinates: 1938324..1940327 (+)
• Length: 667 a.a.
• NCBI ID: WP_013352417.1
• Uniprot ID: A0A9P1JHT7
• Organism: Bacillus amyloliquefaciens DSM 7 = ATCC 23350
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1933324..1945327

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMF_RS41535 (BAMF_1867)	-	1933724..1933873 (+)	150	WP_013352411.1	hypothetical protein	-
BAMF_RS30015 (BAMF_1868)	-	1933860..1934690 (+)	831	WP_013352412.1	prohibitin family protein	-
BAMF_RS30020 (BAMF_1869)	-	1934718..1935167 (-)	450	WP_013352413.1	YndM family protein	-
BAMF_RS30025 (BAMF_1870)	-	1935324..1935752 (+)	429	WP_013352414.1	hypothetical protein	-
BAMF_RS30030 (BAMF_1871)	dinR/lexA	1936101..1936721 (-)	621	WP_007611720.1	transcriptional repressor LexA	Regulator
BAMF_RS30035 (BAMF_1872)	yneA	1936878..1937189 (+)	312	WP_013352415.1	cell division suppressor protein YneA	-
BAMF_RS30040 (BAMF_1873)	-	1937205..1937855 (+)	651	WP_013352416.1	recombinase family protein	-
BAMF_RS30045 (BAMF_1874)	-	1937924..1938157 (+)	234	WP_003153997.1	DUF896 domain-containing protein	-
BAMF_RS30050 (BAMF_1875)	recP/tkt	1938324..1940327 (+)	2004	WP_013352417.1	transketolase	Machinery gene
BAMF_RS30055 (BAMF_1876)	sirA	1940478..1940924 (+)	447	WP_013352418.1	sporulation inhibitor of replication protein SirA	-
BAMF_RS30060 (BAMF_1877)	-	1941010..1941228 (+)	219	WP_003153994.1	YneF family protein	-
BAMF_RS30065 (BAMF_1878)	-	1941300..1941473 (-)	174	WP_088030684.1	aspartyl-phosphate phosphatase Spo0E family protein	-
BAMF_RS30070 (BAMF_1879)	-	1941675..1942382 (+)	708	WP_088030531.1	cytochrome c biogenesis protein CcdA	-
BAMF_RS30075 (BAMF_1880)	pilH	1942467..1942829 (+)	363	WP_013352421.1	response regulator	Machinery gene
BAMF_RS30080 (BAMF_1881)	-	1942909..1943400 (+)	492	WP_088030532.1	CcdC family protein	-
BAMF_RS30085 (BAMF_1882)	-	1943428..1943856 (-)	429	WP_013352423.1	DUF2621 domain-containing protein	-
BAMF_RS30090 (BAMF_1883)	-	1944091..1944462 (-)	372	WP_013352424.1	spore coat protein	-
BAMF_RS30095 (BAMF_1884)	-	1944556..1944702 (-)	147	WP_003153984.1	small acid-soluble spore protein P	-
BAMF_RS30100 (BAMF_1885)	sspO	1944732..1944878 (-)	147	WP_003153982.1	acid-soluble spore protein SspO	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72570.62 Da
• Isoelectric Point: 4.8151

>NTDB_id=32971 BAMF_RS30050 WP_013352417.1 1938324..1940327(+) (recP/tkt) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIDDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGQEESKLTKEAYAWTFEEDFYVPDEVYAHFNQAVKEAGSKKEQEWNELFAAYQE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNAGDFTARDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKLAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYIVSKAQTDAPDALLLATG
SEVGLAIEAQAKLAEENVHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVADRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=32971 BAMF_RS30050 WP_013352417.1 1938324..1940327(+) (recP/tkt) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATACGTACACTGTCTATAGACGCAATTGAAAAAGCTAATTCCGGACA
CCCGGGCATGCCGATGGGAGCCGCTCCGATGGCTTACACGCTGTGGACGAAATTTATGAATGTGAATCCGCAGAATCCAG
GCTGGTTTAACCGCGACCGTTTTGTTTTATCAGCAGGACACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGATGATCTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGACATAC
AGCAGGAGTAGACGCAACGACCGGGCCTCTCGGACAGGGTATCGCGATGGCAGTGGGAATGGCAATCGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGCGATTTGATG
GAAGGCATTTCTTCCGAAGCAGCTTCTCTTGCAGGCCATCTGGAGTTAGGCCGCCTGATCGTATTATACGATTCTAATGA
TATTTCTTTAGACGGTGATTTAGACCGTTCTTTCTCTGAAAATGTAAAACAGCGTTTTGAAGCAATGAACTGGGAAGTCC
TTTATGTTGAGGACGGAAATAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTAATTGAAGTGAAGACCACAATCGGTTTCGGTTCTCCAAACCGCGCGGGTACATCTGGCGTTCACGGCGCTCCATTAGG
ACAAGAAGAGAGCAAGCTGACGAAAGAAGCGTACGCTTGGACATTTGAAGAAGATTTTTATGTTCCGGATGAAGTATACG
CGCATTTCAACCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATCAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGAATGAAAGGCGAGCTTCCGAAAGACTGGGATCAGGAAGTTCCTGT
TTATGAAAAAGGCAGCAGTCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTGAACGGCATCGCTAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAACAAAACGACAATCAAAAATGCAGGAGACTTCACGGCCAGAGACTAC
GCCGGGAAAAACTTCTGGTTCGGGGTCCGTGAATTCGCGATGGGCGCTGCTTTAAACGGAATGGCGCTTCACGGCGGCCT
TCGCGTATTCGGCGGCACATTCTTTGTGTTCTCTGACTATTTAAGACCTGCCATTCGTCTGGCGTCATTAATGGGGCTGC
CTGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGAGAAGACGGACCGACTCACGAACCGATTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCGTGGAAGCTTGCCGT
TCAAAGCCAGGATCACCCGACAGCTCTTGTATTGACACGCCAAAACCTGCCGACAATTGATCAGCAGGCTGAAGAAGCGT
ATGCCGGAGTGGAAAAAGGGGCTTATATCGTTTCCAAAGCACAAACGGATGCACCGGACGCACTTCTTTTAGCGACGGGT
TCTGAAGTCGGACTCGCGATTGAAGCTCAGGCGAAGCTTGCTGAAGAAAACGTTCACGTTTCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTCGAAAAACAATCGGCTGAGTACAAAAACAGCGTACTTCCTCCGAACGTAACGAAACGTCTTGCGATTG
AAATGGGATCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGCGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTGGCTGACCGCGTAAAAAAACTGCTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, C-terminal domain (Transketolase_C) (549-657)

3D structure

• AlphaFold DB: A0A9P1JHT7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	55.891	99.25	0.555