Detailed information NTG0032970

Bioinformatically predicted

Overview

• Name: dinR/lexA
• Type: Regulator
• Locus tag: BAMF_RS30030
• Genome accession: NC_014551
• Coordinates: 1936101..1936721 (-)
• Length: 206 a.a.
• NCBI ID: WP_007611720.1
• Uniprot ID: A0AAI8HP04
• Organism: Bacillus amyloliquefaciens DSM 7 = ATCC 23350
• Function: repressor of recA; repressor of dinR (predicted from homology) Homologous recombination

Genomic Context

Location: 1931101..1941721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMF_RS29995 (BAMF_1863)	-	1931510..1931749 (+)	240	WP_013352407.1	TM2 domain-containing protein	-
BAMF_RS30000 (BAMF_1864)	-	1931920..1932354 (+)	435	WP_013352408.1	dUTP diphosphatase	-
BAMF_RS30005 (BAMF_1865)	-	1932405..1932590 (-)	186	WP_013352409.1	DUF4177 domain-containing protein	-
BAMF_RS30010 (BAMF_1866)	-	1932796..1933617 (+)	822	WP_013352410.1	poly-gamma-glutamate hydrolase family protein	-
BAMF_RS41535 (BAMF_1867)	-	1933724..1933873 (+)	150	WP_013352411.1	hypothetical protein	-
BAMF_RS30015 (BAMF_1868)	-	1933860..1934690 (+)	831	WP_013352412.1	prohibitin family protein	-
BAMF_RS30020 (BAMF_1869)	-	1934718..1935167 (-)	450	WP_013352413.1	YndM family protein	-
BAMF_RS30025 (BAMF_1870)	-	1935324..1935752 (+)	429	WP_013352414.1	hypothetical protein	-
BAMF_RS30030 (BAMF_1871)	dinR/lexA	1936101..1936721 (-)	621	WP_007611720.1	transcriptional repressor LexA	Regulator
BAMF_RS30035 (BAMF_1872)	yneA	1936878..1937189 (+)	312	WP_013352415.1	cell division suppressor protein YneA	-
BAMF_RS30040 (BAMF_1873)	-	1937205..1937855 (+)	651	WP_013352416.1	recombinase family protein	-
BAMF_RS30045 (BAMF_1874)	-	1937924..1938157 (+)	234	WP_003153997.1	DUF896 domain-containing protein	-
BAMF_RS30050 (BAMF_1875)	recP/tkt	1938324..1940327 (+)	2004	WP_013352417.1	transketolase	Machinery gene
BAMF_RS30055 (BAMF_1876)	sirA	1940478..1940924 (+)	447	WP_013352418.1	sporulation inhibitor of replication protein SirA	-
BAMF_RS30060 (BAMF_1877)	-	1941010..1941228 (+)	219	WP_003153994.1	YneF family protein	-
BAMF_RS30065 (BAMF_1878)	-	1941300..1941473 (-)	174	WP_088030684.1	aspartyl-phosphate phosphatase Spo0E family protein	-

Sequence

Protein

• Length: 206 a.a.
• Molecular weight: 23046.64 Da
• Isoelectric Point: 5.1645

>NTDB_id=32970 BAMF_RS30030 WP_007611720.1 1936101..1936721(-) (dinR/lexA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MTKLSKRQLDILRFIKEEVKTKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEVLDEEEVQIPKSQ
VVNVPVIGKVTAGIPITAVENIDEYFPLPDRMVPPGEHVFMLEIMGESMIDAGIFDKDYVIVKQQNTANNGEIVVAMTED
DEATVKRFYKEDNYVRLQPENPTMEPIILQNVSILGKVIGVFRAVH

Nucleotide

• Length: 621 bp

>NTDB_id=32970 BAMF_RS30030 WP_007611720.1 1936101..1936721(-) (dinR/lexA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
ATGACGAAGCTATCAAAAAGGCAGCTTGATATCCTGCGTTTTATTAAAGAAGAGGTAAAAACAAAAGGATATCCGCCTTC
TGTAAGAGAGATAGGAGAAGCAGTAGGACTGGCTTCCAGTTCAACCGTGCACGGACATTTGGCACGGCTTGAGACAAAAG
GCCTGATCAGACGGGACCCTACTAAACCAAGGGCAATTGAGGTATTGGATGAAGAAGAAGTCCAAATTCCGAAAAGCCAG
GTCGTAAATGTTCCGGTAATCGGGAAAGTGACGGCGGGTATTCCGATTACGGCTGTTGAAAATATCGATGAGTATTTTCC
GCTTCCTGACCGGATGGTTCCTCCGGGCGAACATGTATTTATGTTAGAAATCATGGGAGAAAGTATGATTGACGCCGGCA
TTTTTGACAAAGATTACGTCATTGTCAAACAGCAGAACACGGCTAATAACGGGGAAATCGTGGTGGCTATGACCGAAGAT
GATGAAGCGACGGTCAAGCGCTTCTATAAAGAGGACAATTATGTGCGGCTGCAGCCGGAAAATCCGACGATGGAACCGAT
TATCCTGCAAAACGTAAGCATTTTAGGGAAAGTCATCGGCGTATTCAGAGCCGTCCATTAA

Domains

Predicted by InterProScan.

• Peptidase S24-like (Peptidase_S24) (85-199)

• LexA DNA binding domain (LexA_DNA_bind) (1-65)

3D structure

• AlphaFold DB: A0AAI8HP04

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dinR/lexA	Bacillus subtilis subsp. subtilis str. 168	92.718	100	0.927