Detailed information NTG0329321

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: EHN06_RS04675
• Genome accession: NZ_CP034142
• Coordinates: 1036334..1037719 (-)
• Length: 461 a.a.
• NCBI ID: WP_127330616.1
• Uniprot ID: -
• Organism: Marinobacter sp. NP-4(2019)
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1031334..1042719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHN06_RS04665 (EHN06_04665)	-	1031748..1032302 (+)	555	WP_127330612.1	pilus assembly PilX family protein	-
EHN06_RS04670 (EHN06_04670)	-	1032299..1036330 (+)	4032	WP_127330614.1	pilus assembly protein	-
EHN06_RS04675 (EHN06_04675)	pilR	1036334..1037719 (-)	1386	WP_127330616.1	sigma-54-dependent transcriptional regulator	Regulator
EHN06_RS04680 (EHN06_04680)	-	1037764..1039410 (-)	1647	WP_127330618.1	sensor histidine kinase	-
EHN06_RS04685 (EHN06_04685)	-	1039497..1041161 (+)	1665	WP_127330620.1	NAD+ synthase	-
EHN06_RS04690 (EHN06_04690)	-	1041190..1042023 (-)	834	WP_127330622.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 461 a.a.
• Molecular weight: 51073.43 Da
• Isoelectric Point: 5.0483

>NTDB_id=329321 EHN06_RS04675 WP_127330616.1 1036334..1037719(-) (pilR) [Marinobacter sp. NP-4(2019)]
MTTHTALIVDDEPDIRDLLEITLTRMGINTLTAPDITSARKLLEEHHPHLCLTDMNLPDGNGIDLVHWIQQHTPCTPVAV
ITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLSEPKPELEIAPDEPGLLLGNSAEIKRLRNQVRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVDNKEGLFRTADGGTLFLDEVA
DLPIAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGTFRQDLFYRINVIELAVPPLRERPDDIALLA
NHILERIAREYECEPATLTPDAIERLKEYEFPGNVRELENILERAFTLCDNDRIGASDLHLGNAPTPPGLGGAATREITR
NAEQADVPDGEIDLEGYLETIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME

Nucleotide

• Length: 1386 bp

>NTDB_id=329321 EHN06_RS04675 WP_127330616.1 1036334..1037719(-) (pilR) [Marinobacter sp. NP-4(2019)]
ATGACCACTCACACCGCGCTGATTGTAGACGATGAACCGGACATCCGGGATCTTCTGGAAATTACCCTGACCCGCATGGG
GATCAACACCCTGACCGCGCCGGACATTACCAGCGCCCGCAAGCTGCTGGAAGAACACCACCCTCATCTCTGCCTGACCG
ACATGAACCTGCCGGACGGCAACGGTATCGATCTGGTGCACTGGATTCAGCAACATACGCCGTGCACGCCGGTTGCCGTG
ATCACCGCCTACGGCAATATGGACACCGCCATTGAATCCCTGAAAGCCGGCGCCTTCGACTTTGTCTCCAAGCCAGTAGA
GCTTCCACGCTTGCGGGAACTGGTTAATAGCGCACTCAAGCTCTCCGAACCCAAACCGGAGCTGGAGATCGCCCCGGACG
AGCCCGGGCTGCTTCTGGGAAACTCGGCTGAAATCAAACGGCTGCGCAACCAGGTCCGCAAGCTCGCCAGAAGCCAGGCA
CCGGTCTTTATCAGCGGCGAGTCCGGCAGCGGTAAGGAACTGGTGGCGCGGATGATCCACTTGCAGGGGCCACGACGGGA
GGGCCCTTTCATTGCGGTTAACTGTGGTGCCATTCCCTCCGAGCTAATGGAAAGTGAGTTCTTCGGTCACAAGAAAGGCA
GTTTCACCGGCGCGGTGGACAACAAAGAGGGCCTCTTCCGCACCGCTGACGGCGGCACCCTGTTCCTTGACGAAGTCGCC
GACCTGCCCATCGCCATGCAAGTCAAACTGCTCAGGGCGATCCAGGAAAAAGCGGTGCGGCCGGTGGGAGATACCAAAGA
AGTGCCCGTGGACATCCGGGTGCTCAGTGCTACCCACAAGAACCTGCCAGAACTGGTGCAGGAGGGTACGTTCCGCCAGG
ATCTGTTCTACCGTATCAACGTCATTGAGCTGGCCGTGCCACCGCTGCGGGAACGCCCTGATGACATCGCGCTGCTTGCC
AACCATATCCTCGAGCGTATTGCCCGTGAATATGAGTGCGAGCCCGCCACCCTGACGCCCGATGCCATAGAGCGCCTCAA
GGAATACGAGTTTCCCGGCAACGTCCGTGAACTTGAAAACATACTGGAACGGGCCTTTACCCTGTGCGACAACGACCGGA
TCGGCGCCTCCGACCTCCACCTGGGCAACGCCCCCACGCCGCCCGGGCTGGGCGGTGCGGCAACCCGTGAAATCACCCGC
AATGCCGAACAGGCCGACGTCCCCGATGGTGAGATTGACCTCGAAGGTTACCTGGAAACCATAGAGCGACAAGCCATCGA
GAAGGCCCTGGAGGCTACCCGCTGGAACAAGACAGCCGCGGCCAAGCGGCTGGGGATCAGTTTCCGGGCGTTGCGGTATC
GGTTGAAGAAGTTGGGGATGGAGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (418-458)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

• Response regulator receiver domain (Response_reg) (7-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	64.208	100	0.642
pilR	Acinetobacter baumannii strain A118	53.275	99.349	0.529
luxO	Vibrio cholerae strain A1552	37.111	97.614	0.362