Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SUB_RS02765 Genome accession   NC_012004
Coordinates   505481..506482 (+) Length   333 a.a.
NCBI ID   WP_012658062.1    Uniprot ID   A0A2X4GXW1
Organism   Streptococcus uberis 0140J     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 500481..511482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SUB_RS02740 (SUB0531) - 500796..501110 (+) 315 WP_012658057.1 PTS cellobiose transporter subunit IIA -
  SUB_RS02745 (SUB0532) - 501136..501654 (+) 519 WP_012658058.1 hypothetical protein -
  SUB_RS02750 (SUB0533) celB 501681..503009 (+) 1329 WP_012658059.1 PTS cellobiose transporter subunit IIC -
  SUB_RS02755 (SUB0534) - 503075..504163 (+) 1089 WP_012658060.1 DUF871 domain-containing protein -
  SUB_RS02760 (SUB0535) - 504224..505309 (-) 1086 WP_012658061.1 aminopeptidase P family protein -
  SUB_RS02765 (SUB0536) ccpA 505481..506482 (+) 1002 WP_012658062.1 catabolite control protein A Regulator
  SUB_RS02770 (SUB0537) - 506523..507986 (+) 1464 WP_012658063.1 alpha-amylase -
  SUB_RS02775 (SUB0538) - 508060..509058 (+) 999 WP_012658064.1 glycosyltransferase family 4 protein -
  SUB_RS02780 (SUB0539) - 509060..510394 (+) 1335 WP_012658065.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36662.76 Da        Isoelectric Point: 5.5101

>NTDB_id=32917 SUB_RS02765 WP_012658062.1 505481..506482(+) (ccpA) [Streptococcus uberis 0140J]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYQAAVAEVIDILAENHKKIAFVSGPLIDDINGKVRLSGYKEGLKKNKLDYKEGLVFEANYSYKEGYELAQRVINSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVVEYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKRRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=32917 SUB_RS02765 WP_012658062.1 505481..506482(+) (ccpA) [Streptococcus uberis 0140J]
ATGAACACAGATGATACCATTACGATTTATGATGTTGCTCGTGAAGCTGGTGTTTCAATGGCAACTGTCAGCCGTGTTGT
AAATGGAAATAAAAACGTTAAGGAAAATACACGCAAAAAAGTTTTAGAAGTTATCGATCGTTTAGATTATCGTCCTAACG
CCGTCGCTCGTGGACTTGCAAGTAAGAAAACAACAACTGTTGGTGTTGTTATTCCAAATATTGCCAATGCCTATTTTTCA
ATTTTAGCCAAAGGTATTGATGATATCGCAGCCATGTACAAATATAACATTGTCTTGGCATCTAGTGACGAGGACGATGA
TAAAGAAGTCAATGTTGTCAATACCCTCTTTGCCAAACAAGTTGATGGGATTATTTTCATGGGTCACCATTTAACAGAAA
AAATTCGTGCAGAATTTTCACGTTCTAGAACCCCTATCGTTTTAGCAGGTACCGTTGACCTTGAACACCAACTCCCAAGC
GTTAATATTGACTATCAAGCAGCAGTCGCTGAGGTTATTGATATTTTAGCAGAGAACCATAAGAAAATCGCATTTGTATC
AGGTCCACTTATTGATGATATCAATGGTAAAGTACGTCTTTCTGGTTATAAAGAAGGCCTTAAAAAGAATAAATTAGATT
ATAAAGAAGGCTTAGTCTTTGAAGCCAATTATTCTTACAAAGAAGGCTATGAATTGGCACAACGTGTTATTAATTCTGGA
GCAACTGCAGCTTATGTCGGTGAAGATGAATTAGCAGCTGGTTTATTAAATGGTCTCTTTGCGGCAGGAAAAAGTGTACC
TGAAGATTTTGAAATCATTACAAGTAATGATTCACCTGTTGTTGAATACACTCGTCCTAACTTGAGTTCAATTAGTCAAC
CAGTTTATGATTTAGGTGCCGTAAGTATGCGTATGTTAACAAAAATCATGAACAAAGAAGAATTAGAAGAAAAAGAGATT
CTATTAAACCATGGCATCAAACGTCGTGGAACAACAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X4GXW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.279

100

0.793
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.287

99.399

0.55

Multiple sequence alignment