Detailed information NTG0032865

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: SP670_RS10410
• Genome accession: NC_014498
• Coordinates: 1930459..1931358 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904861.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae 670-6B
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1925459..1936358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP670_RS10385 (SP670_2062)	rsmA	1925789..1926661 (-)	873	WP_001216876.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
SP670_RS10390 (SP670_2063)	-	1926792..1927100 (-)	309	WP_000333257.1	hypothetical protein	-
SP670_RS10395 (SP670_2064)	-	1927093..1927734 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
SP670_RS10400 (SP670_2065)	-	1927736..1929766 (-)	2031	WP_000825239.1	bacteriocin-associated integral membrane family protein	-
SP670_RS10405 (SP670_2066)	-	1929843..1930139 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
SP670_RS10410 (SP670_2067)	comR	1930459..1931358 (-)	900	WP_000904861.1	helix-turn-helix transcriptional regulator	Regulator
SP670_RS10415 (SP670_2068)	rnmV	1931430..1931990 (-)	561	WP_000660009.1	ribonuclease M5	-
SP670_RS10420 (SP670_2069)	-	1931990..1932763 (-)	774	WP_000575606.1	TatD family hydrolase	-
SP670_RS10425 (SP670_2070)	-	1933068..1933787 (-)	720	Protein_1970	DUF1542 domain-containing protein	-
SP670_RS10430 (SP670_2071)	rpmH	1933996..1934130 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
SP670_RS10435 (SP670_2072)	-	1934275..1935489 (-)	1215	WP_000666471.1	pyridoxal phosphate-dependent aminotransferase	-
SP670_RS10440 (SP670_2073)	-	1935645..1935938 (-)	294	WP_000977371.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35351.12 Da
• Isoelectric Point: 4.8298

>NTDB_id=32865 SP670_RS10410 WP_000904861.1 1930459..1931358(-) (comR) [Streptococcus pneumoniae 670-6B]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLIFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=32865 SP670_RS10410 WP_000904861.1 1930459..1931358(-) (comR) [Streptococcus pneumoniae 670-6B]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTATATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365
comR	Streptococcus suis P1/7	37.113	97.324	0.361
comR	Streptococcus suis 05ZYH33	37.113	97.324	0.361