Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | EG882_RS11345 | Genome accession | NZ_CP033967 |
| Coordinates | 2149878..2150915 (+) | Length | 345 a.a. |
| NCBI ID | WP_124692841.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain 1B-23 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2144878..2155915
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG882_RS11325 (EG882_11325) | - | 2145363..2146193 (+) | 831 | WP_015240214.1 | STAS domain-containing protein | - |
| EG882_RS11330 (EG882_11330) | - | 2146231..2147532 (-) | 1302 | WP_012117986.1 | hemolysin family protein | - |
| EG882_RS11335 (EG882_11335) | - | 2147678..2148628 (+) | 951 | WP_007408319.1 | magnesium transporter CorA family protein | - |
| EG882_RS11340 (EG882_11340) | comGA | 2148821..2149891 (+) | 1071 | WP_124692840.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EG882_RS11345 (EG882_11345) | comGB | 2149878..2150915 (+) | 1038 | WP_124692841.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EG882_RS11350 (EG882_11350) | comGC | 2150962..2151228 (+) | 267 | WP_042635730.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EG882_RS11355 (EG882_11355) | comGD | 2151218..2151655 (+) | 438 | WP_015240210.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EG882_RS11360 (EG882_11360) | comGE | 2151639..2151953 (+) | 315 | WP_012117982.1 | competence type IV pilus minor pilin ComGE | - |
| EG882_RS11365 (EG882_11365) | comGF | 2151862..2152362 (+) | 501 | WP_256994853.1 | competence type IV pilus minor pilin ComGF | - |
| EG882_RS11370 (EG882_11370) | comGG | 2152363..2152740 (+) | 378 | WP_015240208.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| EG882_RS11375 (EG882_11375) | - | 2152797..2152976 (+) | 180 | WP_003153093.1 | YqzE family protein | - |
| EG882_RS11380 (EG882_11380) | - | 2153016..2153345 (-) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| EG882_RS11385 (EG882_11385) | tapA | 2153604..2154275 (+) | 672 | WP_124692843.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EG882_RS11390 (EG882_11390) | - | 2154247..2154831 (+) | 585 | WP_015240205.1 | signal peptidase I | - |
| EG882_RS11395 (EG882_11395) | - | 2154896..2155681 (+) | 786 | WP_007408329.1 | TasA family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39561.82 Da Isoelectric Point: 9.6517
>NTDB_id=327474 EG882_RS11345 WP_124692841.1 2149878..2150915(+) (comGB) [Bacillus velezensis strain 1B-23]
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGDLLQRKLMQTNQIKKMLRYPMFLISSVCVMFYILQTLIIPQFSGIYQSMNMNTSGATAFIFAFF
GHFHEAYALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGDLLQRKLMQTNQIKKMLRYPMFLISSVCVMFYILQTLIIPQFSGIYQSMNMNTSGATAFIFAFF
GHFHEAYALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=327474 EG882_RS11345 WP_124692841.1 2149878..2150915(+) (comGB) [Bacillus velezensis strain 1B-23]
ATGAAGCGGATTAAACGAACCTGGCCCTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACAGAAAAAGG
ATACAGTCTGATTGAAGGGCTCAGGCTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATCC
GCCGGCTGAGGGAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCACAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAGAAACACGGGGAATTGCCGGGGGCGATGAAACAAAGCGGCGACTTGTTACAGAGAAAGCTTATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATATCTTCCGTCTGCGTCATGTTTTATATCCTGCAAACTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACATCCGGTGCGACTGCTTTCATCTTTGCATTTTTT
GGGCATTTTCATGAAGCCTACGCACTGGCGCTGTCCGCCGCTTTCTGCTTGTTTTTGTATGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGATAAAATGCTGATTGTTGTGAAAATACCCCTCTTGGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTATCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCGGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
ATGAAGCGGATTAAACGAACCTGGCCCTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACAGAAAAAGG
ATACAGTCTGATTGAAGGGCTCAGGCTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATCC
GCCGGCTGAGGGAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCACAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAGAAACACGGGGAATTGCCGGGGGCGATGAAACAAAGCGGCGACTTGTTACAGAGAAAGCTTATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATATCTTCCGTCTGCGTCATGTTTTATATCCTGCAAACTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACATCCGGTGCGACTGCTTTCATCTTTGCATTTTTT
GGGCATTTTCATGAAGCCTACGCACTGGCGCTGTCCGCCGCTTTCTGCTTGTTTTTGTATGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGATAAAATGCTGATTGTTGTGAAAATACCCCTCTTGGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTATCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCGGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
65.635 |
93.623 |
0.614 |