Detailed information NTG0032747

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: HPB8_RS03175
• Genome accession: NC_014256
• Coordinates: 645017..645568 (+)
• Length: 183 a.a.
• NCBI ID: WP_000635139.1
• Uniprot ID: -
• Organism: Helicobacter pylori B8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 640017..650568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPB8_RS03160 (HPB8_667)	cysS	640197..641594 (-)	1398	WP_000471364.1	cysteine--tRNA ligase	-
HPB8_RS03165 (HPB8_668)	murJ	641595..643055 (-)	1461	WP_000913575.1	murein biosynthesis integral membrane protein MurJ	-
HPB8_RS03170 (HPB8_669)	-	643148..644992 (+)	1845	WP_000051313.1	FapA family protein	-
HPB8_RS03175 (HPB8_670)	ruvA	645017..645568 (+)	552	WP_000635139.1	Holliday junction branch migration protein RuvA	Machinery gene
HPB8_RS08850	-	645659..648415 (+)	2757	Protein_599	DUF3519 domain-containing protein	-
HPB8_RS03200 (HPB8_673)	-	648419..648851 (+)	433	Protein_600	hypothetical protein	-
HPB8_RS03205 (HPB8_674)	-	648848..649840 (+)	993	WP_000611625.1	hypothetical protein	-

Sequence

Protein

• Length: 183 a.a.
• Molecular weight: 20227.87 Da
• Isoelectric Point: 8.4948

>NTDB_id=32747 HPB8_RS03175 WP_000635139.1 645017..645568(+) (ruvA) [Helicobacter pylori B8]
MIVGLIGVVEKISALEAHIEVQGVVYGVQVSMRTSALLEVGQKARLKILQVIKEDAHLLYGFLEESEKILFERLLKINGV
GGRIALAILSSFSPNEFESIIATKEVKKLQQVPGIGKKLADKIMVDLIGFFIQDENRPARNEVFLALESLGFKSTEINKV
LKTLKPHLSIEAAIKEALQQLHS

Nucleotide

• Length: 552 bp

>NTDB_id=32747 HPB8_RS03175 WP_000635139.1 645017..645568(+) (ruvA) [Helicobacter pylori B8]
ATGATAGTGGGTTTGATAGGGGTTGTGGAAAAAATCTCTGCTTTAGAAGCGCATATAGAAGTGCAAGGGGTTGTTTATGG
GGTGCAAGTTTCTATGCGCACTTCTGCTTTGCTTGAAGTGGGTCAAAAAGCGCGTTTGAAAATCTTACAAGTGATTAAAG
AAGATGCGCATCTTTTATACGGGTTTTTAGAAGAGAGCGAAAAAATCTTATTTGAAAGGCTTTTAAAAATCAATGGGGTA
GGGGGTCGTATCGCTTTAGCCATTCTTTCAAGCTTTTCGCCGAATGAATTTGAAAGCATTATCGCTACTAAAGAAGTCAA
AAAACTCCAGCAAGTCCCAGGCATTGGAAAAAAGCTCGCTGATAAGATCATGGTGGATCTCATTGGCTTTTTCATTCAAG
ATGAAAATAGACCTGCGCGCAATGAAGTCTTTTTAGCCCTAGAGAGTTTGGGCTTTAAAAGCACCGAAATCAATAAAGTT
TTAAAAACCCTAAAACCCCATCTCAGTATAGAAGCAGCGATTAAAGAAGCCTTACAACAACTGCACTCTTAA

Domains

Predicted by InterProScan.

• RuvA N terminal domain (RuvA_N) (1-61)

• RuvA, C-terminal domain (RuvA_C) (139-182)

• Helix-hairpin-helix domain (HHH_5) (71-127)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Helicobacter pylori 26695	95.082	100	0.951
ruvA	Streptococcus pneumoniae TIGR4	33.846	100	0.361
ruvA	Streptococcus pneumoniae R6	33.846	100	0.361
ruvA	Streptococcus pneumoniae D39	33.846	100	0.361