Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   EG882_RS01370 Genome accession   NZ_CP033967
Coordinates   236143..237096 (-) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus velezensis strain 1B-23     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 231143..242096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EG882_RS01350 (EG882_01350) - 232022..233446 (+) 1425 WP_025284231.1 MDR family MFS transporter -
  EG882_RS01355 (EG882_01355) - 233488..234432 (-) 945 WP_025284230.1 siderophore ABC transporter substrate-binding protein -
  EG882_RS01360 (EG882_01360) - 234454..235212 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  EG882_RS01365 (EG882_01365) - 235206..236153 (-) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  EG882_RS01370 (EG882_01370) ceuB 236143..237096 (-) 954 WP_059366593.1 ABC transporter permease Machinery gene
  EG882_RS01375 (EG882_01375) - 237510..238874 (+) 1365 WP_094031502.1 aspartate kinase -
  EG882_RS01380 (EG882_01380) - 238969..239064 (+) 96 WP_012116800.1 YjcZ family sporulation protein -
  EG882_RS01385 (EG882_01385) phrC 239213..239332 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  EG882_RS01390 (EG882_01390) rapC 239316..240464 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  EG882_RS01395 (EG882_01395) - 240617..242050 (-) 1434 WP_162492834.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=327433 EG882_RS01370 WP_059366593.1 236143..237096(-) (ceuB) [Bacillus velezensis strain 1B-23]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=327433 EG882_RS01370 WP_059366593.1 236143..237096(-) (ceuB) [Bacillus velezensis strain 1B-23]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment