Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   FNL98_RS08755 Genome accession   NZ_CP041585
Coordinates   1507439..1508050 (-) Length   203 a.a.
NCBI ID   WP_050169631.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain NJ1711654     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1502439..1513050
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL98_RS08725 (FNL98_08725) dut 1503697..1504149 (-) 453 WP_103195211.1 dUTP diphosphatase -
  FNL98_RS08730 (FNL98_08730) - 1504315..1505022 (+) 708 Protein_1509 AzlC family ABC transporter permease -
  FNL98_RS08735 (FNL98_08735) - 1505019..1505327 (+) 309 WP_010951048.1 AzlD family protein -
  FNL98_RS08740 (FNL98_08740) pilL 1505397..1505870 (-) 474 WP_025455870.1 PilX family type IV pilin Machinery gene
  FNL98_RS08745 (FNL98_08745) pilK 1505872..1506483 (-) 612 WP_003687918.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  FNL98_RS08750 (FNL98_08750) pilJ 1506462..1507442 (-) 981 WP_010951046.1 PilW family protein Machinery gene
  FNL98_RS08755 (FNL98_08755) pilV 1507439..1508050 (-) 612 WP_050169631.1 type IV pilus modification protein PilV Regulator
  FNL98_RS08760 (FNL98_08760) pilH 1508082..1508747 (-) 666 WP_047918678.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  FNL98_RS08765 (FNL98_08765) dnaB 1508902..1510308 (-) 1407 WP_047917169.1 replicative DNA helicase -
  FNL98_RS08775 (FNL98_08775) - 1510472..1511053 (+) 582 WP_047923823.1 superoxide dismutase -
  FNL98_RS08785 (FNL98_08785) - 1511285..1511794 (-) 510 WP_003687909.1 isoprenylcysteine carboxyl methyltransferase family protein -
  FNL98_RS08790 (FNL98_08790) - 1512125..1512457 (-) 333 WP_003687908.1 hypothetical protein -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22076.13 Da        Isoelectric Point: 4.8546

>NTDB_id=326966 FNL98_RS08755 WP_050169631.1 1507439..1508050(-) (pilV) [Neisseria gonorrhoeae strain NJ1711654]
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDLDSNKKN
YSLYMGKQTLSAVDGKFMLDAEKSKAQLAEEQLKRFSHELKNALPDAVAIHYAVCKDSSGDAPTLSDSGAFSSNCDNKAN
GDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=326966 FNL98_RS08755 WP_050169631.1 1507439..1508050(-) (pilV) [Neisseria gonorrhoeae strain NJ1711654]
ATGAAGAATAATGATTGCTTGCGCCTGAAAAATCCCCAGTCCGGTATGGCGTTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCATTGCTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAAACGCAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTTGGACAGCAACAAGAAAAAC
TATAGTCTTTACATGGGAAAACAGACACTATCAGCTGTGGATGGTAAGTTTATGCTTGATGCCGAGAAAAGTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTCATGAGCTGAAAAATGCCTTGCCGGATGCGGTAGCTATTCATTACGCCG
TCTGCAAGGATTCGTCGGGTGACGCGCCGACATTGTCCGACAGCGGTGCTTTTTCTTCAAATTGCGACAATAAGGCAAAC
GGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGAAGTGAG
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

89.372

100

0.911
  pilV/pilI Neisseria gonorrhoeae MS11

83.744

100

0.837

Multiple sequence alignment