Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   EG365_RS11225 Genome accession   NZ_CP033866
Coordinates   2325306..2325716 (+) Length   136 a.a.
NCBI ID   WP_002017231.1    Uniprot ID   N9KEH5
Organism   Acinetobacter sp. FDAARGOS_494     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2320306..2330716
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EG365_RS11200 (EG365_11210) - 2320845..2321513 (-) 669 Protein_2158 SDR family oxidoreductase -
  EG365_RS11210 (EG365_11220) blaOXA 2322721..2323541 (+) 821 Protein_2160 OXA-23 family carbapenem-hydrolyzing class D beta-lactamase -
  EG365_RS11215 (EG365_11225) - 2323646..2324419 (-) 774 WP_000682845.1 ATP-binding protein -
  EG365_RS11220 (EG365_11230) mazG 2324531..2325337 (+) 807 WP_000359483.1 nucleoside triphosphate pyrophosphohydrolase -
  EG365_RS11225 (EG365_11235) comEA 2325306..2325716 (+) 411 WP_002017231.1 ComEA family DNA-binding protein Machinery gene
  EG365_RS11230 (EG365_11240) pcnB 2325841..2327304 (+) 1464 WP_001194207.1 polynucleotide adenylyltransferase PcnB -
  EG365_RS11235 (EG365_11245) folK 2327301..2327783 (+) 483 WP_000219213.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  EG365_RS11240 (EG365_11250) panB 2327829..2328638 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  EG365_RS11245 (EG365_11255) panC 2328642..2329490 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  EG365_RS11250 (EG365_11260) rapZ 2329513..2330364 (+) 852 WP_000821671.1 RNase adapter RapZ -
  EG365_RS11255 (EG365_11265) - 2330361..2330630 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence


Protein


Download         Length: 136 a.a.        Molecular weight: 15654.89 Da        Isoelectric Point: 10.3828

>NTDB_id=326622 EG365_RS11225 WP_002017231.1 2325306..2325716(+) (comEA) [Acinetobacter sp. FDAARGOS_494]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=326622 EG365_RS11225 WP_002017231.1 2325306..2325716(+) (comEA) [Acinetobacter sp. FDAARGOS_494]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains


Predicted by InterproScan.

(74-134)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9KEH5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

97.794

100

0.978

  comEA Acinetobacter baumannii D1279779

95.588

100

0.956

  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412


Multiple sequence alignment