Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FNE82_RS13405 | Genome accession | NZ_CP041433 |
| Coordinates | 2742062..2742502 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360902.1 | Uniprot ID | A7ZHJ7 |
| Organism | Escherichia coli strain STEC313 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2737062..2747502
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE82_RS13385 (FNE82_13710) | coaE | 2737552..2738172 (-) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
| FNE82_RS25435 | - | 2738197..2738241 (+) | 45 | WP_120795372.1 | protein YacM | - |
| FNE82_RS13390 (FNE82_13715) | guaC | 2738397..2739440 (+) | 1044 | WP_001217338.1 | GMP reductase | - |
| FNE82_RS13395 (FNE82_13720) | hofC | 2739475..2740677 (-) | 1203 | WP_000157229.1 | protein transport protein HofC | - |
| FNE82_RS13400 (FNE82_13725) | pilB | 2740667..2742052 (-) | 1386 | WP_001025155.1 | type II secretion system protein GspE | Machinery gene |
| FNE82_RS13405 (FNE82_13730) | pilA | 2742062..2742502 (-) | 441 | WP_000360902.1 | prepilin peptidase-dependent pilin | Machinery gene |
| FNE82_RS13410 (FNE82_13735) | nadC | 2742705..2743598 (-) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| FNE82_RS13415 (FNE82_13740) | ampD | 2743686..2744237 (+) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| FNE82_RS13420 (FNE82_13745) | ampE | 2744234..2745088 (+) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| FNE82_RS13425 (FNE82_13750) | aroP | 2745131..2746504 (-) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15630.76 Da Isoelectric Point: 4.5559
>NTDB_id=326453 FNE82_RS13405 WP_000360902.1 2742062..2742502(-) (pilA) [Escherichia coli strain STEC313]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALHQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALHQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=326453 FNE82_RS13405 WP_000360902.1 2742062..2742502(-) (pilA) [Escherichia coli strain STEC313]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCATC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCATC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
41.791 |
91.781 |
0.384 |
| pilA | Haemophilus influenzae Rd KW20 |
41.045 |
91.781 |
0.377 |