Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   EGY13_RS03150 Genome accession   NZ_CP033858
Coordinates   552382..552807 (+) Length   141 a.a.
NCBI ID   WP_000788336.1    Uniprot ID   A0A0J0ZME6
Organism   Acinetobacter sp. FDAARGOS_493     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 547382..557807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGY13_RS03140 (EGY13_03140) pilY1 548038..551892 (+) 3855 WP_000768953.1 PilC/PilY family type IV pilus protein Machinery gene
  EGY13_RS03145 (EGY13_03145) pilY2 551903..552385 (+) 483 WP_001046489.1 type IV pilin protein Machinery gene
  EGY13_RS03150 (EGY13_03150) pilE 552382..552807 (+) 426 WP_000788336.1 type IV pilin protein Machinery gene
  EGY13_RS03155 (EGY13_03155) rpsP 552954..553205 (+) 252 WP_000260334.1 30S ribosomal protein S16 -
  EGY13_RS03160 (EGY13_03160) rimM 553225..553773 (+) 549 WP_000189236.1 ribosome maturation factor RimM -
  EGY13_RS03165 (EGY13_03165) trmD 553819..554559 (+) 741 WP_000464595.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD -
  EGY13_RS03170 (EGY13_03170) rplS 554767..555135 (+) 369 WP_000014562.1 50S ribosomal protein L19 -
  EGY13_RS03175 (EGY13_03175) - 555188..556129 (-) 942 WP_085941363.1 lipase family alpha/beta hydrolase -
  EGY13_RS03180 (EGY13_03180) - 556244..557278 (-) 1035 WP_001189449.1 lipase secretion chaperone -

Sequence

Protein


Download         Length: 141 a.a.        Molecular weight: 15175.41 Da        Isoelectric Point: 7.8144

>NTDB_id=326452 EGY13_RS03150 WP_000788336.1 552382..552807(+) (pilE) [Acinetobacter sp. FDAARGOS_493]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE

Nucleotide


Download         Length: 426 bp        

>NTDB_id=326452 EGY13_RS03150 WP_000788336.1 552382..552807(+) (pilE) [Acinetobacter sp. FDAARGOS_493]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA

Domains

Predicted by InterproScan.

Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS)

(26-115)

Prokaryotic N-terminal methylation motif (N_methyl)

(2-24)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J0ZME6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Acinetobacter baumannii D1279779

90.071

100

0.901
  comF Acinetobacter baylyi ADP1

49.286

99.291

0.489

Multiple sequence alignment