Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | EGX83_RS13720 | Genome accession | NZ_CP033768 |
| Coordinates | 2865852..2866334 (-) | Length | 160 a.a. |
| NCBI ID | WP_032058632.1 | Uniprot ID | A0A009PK09 |
| Organism | Acinetobacter baumannii strain FDAARGOS_533 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2860852..2871334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX83_RS13685 (EGX83_13680) | - | 2860963..2861994 (+) | 1032 | WP_001189457.1 | lipase secretion chaperone | - |
| EGX83_RS13690 (EGX83_13685) | - | 2862109..2863050 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| EGX83_RS13695 (EGX83_13690) | rplS | 2863102..2863470 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| EGX83_RS13700 (EGX83_13695) | trmD | 2863678..2864418 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| EGX83_RS13705 (EGX83_13700) | rimM | 2864464..2865012 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| EGX83_RS13710 (EGX83_13705) | rpsP | 2865032..2865283 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| EGX83_RS13715 (EGX83_13710) | pilE | 2865430..2865855 (-) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| EGX83_RS13720 (EGX83_13715) | pilY2 | 2865852..2866334 (-) | 483 | WP_032058632.1 | type IV pilin protein | Machinery gene |
| EGX83_RS13725 (EGX83_13720) | pilY1 | 2866347..2870201 (-) | 3855 | WP_188199216.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| EGX83_RS13730 (EGX83_13725) | pilX | 2870213..2871031 (-) | 819 | WP_000149376.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17533.76 Da Isoelectric Point: 8.4834
>NTDB_id=325554 EGX83_RS13720 WP_032058632.1 2865852..2866334(-) (pilY2) [Acinetobacter baumannii strain FDAARGOS_533]
MNKYSILRFNQGVTLIELMVVVVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
MNKYSILRFNQGVTLIELMVVVVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=325554 EGX83_RS13720 WP_032058632.1 2865852..2866334(-) (pilY2) [Acinetobacter baumannii strain FDAARGOS_533]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGGTTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGGTATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGGTTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGGTATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.125 |
100 |
0.931 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |