Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   BLCSL_RS08840 Genome accession   NZ_CP041154
Coordinates   1721775..1723823 (+) Length   682 a.a.
NCBI ID   WP_003181696.1    Uniprot ID   -
Organism   Bacillus licheniformis strain CSL2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1716775..1728823
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLCSL_RS08810 (BLCSL_08810) spoVM 1717322..1717402 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  BLCSL_RS08815 (BLCSL_08815) rpmB 1717507..1717695 (-) 189 WP_003181685.1 50S ribosomal protein L28 -
  BLCSL_RS08820 (BLCSL_08820) - 1717983..1718345 (+) 363 WP_003181687.1 Asp23/Gls24 family envelope stress response protein -
  BLCSL_RS08825 (BLCSL_08825) - 1718363..1720033 (+) 1671 WP_003181689.1 DAK2 domain-containing protein -
  BLCSL_RS08830 (BLCSL_08830) sdaAB 1720214..1720876 (+) 663 WP_003181691.1 L-serine ammonia-lyase, iron-sulfur-dependent subunit beta -
  BLCSL_RS08835 (BLCSL_08835) sdaAA 1720895..1721797 (+) 903 WP_003181693.1 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha -
  BLCSL_RS08840 (BLCSL_08840) recG 1721775..1723823 (+) 2049 WP_003181696.1 ATP-dependent DNA helicase RecG Machinery gene
  BLCSL_RS08845 (BLCSL_08845) fapR 1723940..1724506 (+) 567 WP_003181698.1 transcription factor FapR -
  BLCSL_RS08850 (BLCSL_08850) plsX 1724524..1725516 (+) 993 WP_003181700.1 phosphate acyltransferase PlsX -
  BLCSL_RS08855 (BLCSL_08855) fabD 1725534..1726493 (+) 960 WP_003181702.1 ACP S-malonyltransferase -
  BLCSL_RS08860 (BLCSL_08860) fabG 1726480..1727223 (+) 744 WP_003181704.1 3-oxoacyl-[acyl-carrier-protein] reductase -
  BLCSL_RS08865 (BLCSL_08865) acpP 1727300..1727533 (+) 234 WP_003181706.1 acyl carrier protein -
  BLCSL_RS08870 (BLCSL_08870) rnc 1727675..1728424 (+) 750 WP_009328527.1 ribonuclease III -

Sequence


Protein


Download         Length: 682 a.a.        Molecular weight: 77613.10 Da        Isoelectric Point: 7.3550

>NTDB_id=324927 BLCSL_RS08840 WP_003181696.1 1721775..1723823(+) (recG) [Bacillus licheniformis strain CSL2]
MEHNLQLSISVIKGVGTETEKTLNELGIYTVLDLLNYFPYRYDDYELRDLEDVAHDERVTVEGKVHSEPSLAYYGKKRSR
LTFRLLVGNYLITAVCFNRPYLKKKLAIGSIVTVTGKWDKHRQSVMVQELKNGPHQGDQSIEPVYSVKENITVKTMRKLI
QEAVRSHLPFAEDPLPEKLRTAYKLLSYQEAVKAMHKPESREALKHARRRFVYEEFLLFQLKMQALRKFEREASDGISHT
FRLEDVNSFVKSLPFPLTNAQAKALDDILRDMASGYKMNRLLQGDVGSGKTAVAAIALYASLLSGFQGAMMVPTEILAEQ
HADSLVSLFEQHDVNVALLTSSVKGKRRRELLDRLKEGEIDILVGTHALIQDDVHFKQLGLVITDEQHRFGVEQRKKLRS
KGKDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVKHDMLERILAFIDKELKKGRQAYVICPLIEESD
KLDVQNAIDVHSMLTHAFRGRWQIGLMHGKLSNDEKEQVMRQFSKNECQILVSTTVVEVGVNVPNATVMLIYDADRFGLS
QLHQLRGRVGRGDHQSYCILMADPKSETGKERMSIMSETTDGFELSEKDLELRGPGDFFGKKQSGMPEFKVADMVHDYRA
LETARRDAAELVSSKAFWTDAEYKSLREHLQNSGVMDGEKLS

Nucleotide


Download         Length: 2049 bp        

>NTDB_id=324927 BLCSL_RS08840 WP_003181696.1 1721775..1723823(+) (recG) [Bacillus licheniformis strain CSL2]
GTGGAACACAATCTGCAACTTAGTATATCTGTTATAAAAGGCGTCGGGACGGAAACGGAAAAAACGTTGAACGAGCTCGG
AATCTATACGGTTCTCGATCTTTTAAACTACTTCCCGTACCGATATGACGATTATGAATTGCGCGATTTGGAAGATGTGG
CACACGATGAACGAGTGACGGTGGAAGGGAAGGTTCACAGCGAGCCTTCTCTTGCCTATTACGGGAAAAAGCGGAGCCGT
CTCACGTTCCGGCTTTTGGTCGGGAACTATTTGATCACAGCGGTTTGCTTTAACAGGCCTTATTTGAAAAAAAAGCTTGC
GATCGGCTCGATTGTTACCGTAACCGGAAAATGGGACAAGCACAGACAATCCGTGATGGTGCAAGAGCTGAAAAACGGGC
CGCACCAGGGTGATCAGTCGATTGAACCCGTATACTCCGTCAAAGAAAACATCACCGTAAAGACGATGAGGAAATTGATT
CAGGAAGCTGTCCGCAGCCATTTGCCGTTTGCCGAAGATCCTCTTCCGGAAAAGCTTCGGACCGCCTACAAACTTCTGTC
TTACCAGGAGGCGGTAAAGGCGATGCACAAGCCCGAGTCGAGGGAAGCTTTAAAGCATGCGCGGCGCCGTTTTGTATATG
AGGAATTTTTGCTGTTTCAGCTGAAAATGCAGGCTTTGCGAAAGTTCGAGCGGGAAGCGTCCGACGGAATCAGCCACACC
TTTCGGCTCGAAGACGTCAATTCGTTTGTCAAAAGCCTTCCGTTTCCTTTGACAAACGCGCAGGCGAAAGCGCTCGACGA
CATATTAAGGGACATGGCTTCAGGGTATAAAATGAATCGGCTTTTGCAAGGAGACGTCGGTTCAGGCAAAACAGCCGTCG
CCGCGATTGCGCTATACGCCTCGCTGCTTTCCGGATTCCAGGGGGCGATGATGGTTCCGACCGAAATACTGGCGGAACAG
CACGCCGATTCGCTTGTATCCCTCTTTGAGCAGCACGACGTCAATGTGGCGCTTTTAACAAGCTCTGTGAAAGGGAAAAG
GAGAAGAGAGCTTTTAGACAGATTAAAAGAAGGAGAAATTGATATTTTGGTGGGGACGCACGCCCTTATTCAGGACGATG
TCCACTTTAAACAGCTCGGGCTCGTGATCACCGATGAACAGCACCGCTTCGGCGTCGAGCAAAGAAAAAAACTGAGAAGC
AAAGGGAAAGATCCCGATGTCTTGTTTATGACGGCGACGCCGATTCCGAGAACACTGGCGATCACGGTTTTCGGGGAAAT
GGATGTGTCCGTCATCGATGAAATGCCGGCTGGGCGAAAGCGGATCGAGACGTATTGGGTAAAGCACGACATGCTCGAAC
GGATTCTCGCGTTTATCGATAAAGAACTGAAAAAAGGCAGACAGGCGTATGTGATCTGTCCCTTGATTGAAGAGTCGGAC
AAGCTCGACGTTCAAAATGCAATTGATGTGCACAGCATGCTGACTCATGCCTTCAGGGGAAGATGGCAGATCGGTCTCAT
GCACGGAAAGCTGTCAAATGACGAGAAAGAACAGGTAATGAGGCAGTTCAGCAAAAACGAATGCCAGATTCTCGTTTCCA
CAACCGTCGTTGAAGTCGGGGTAAACGTTCCGAATGCGACGGTCATGCTGATCTATGATGCCGACCGGTTCGGTCTTTCC
CAGCTGCATCAGCTTCGCGGCCGGGTCGGACGGGGCGATCACCAGTCGTATTGCATCCTGATGGCAGACCCGAAATCTGA
GACGGGAAAAGAGCGCATGAGCATCATGTCTGAGACGACGGACGGCTTTGAGCTTTCTGAAAAAGATCTTGAACTCAGAG
GGCCCGGGGACTTTTTCGGCAAGAAACAGAGCGGGATGCCGGAGTTTAAAGTCGCCGACATGGTTCACGACTACCGCGCG
CTGGAAACGGCAAGAAGAGACGCTGCAGAACTTGTCTCTTCAAAAGCGTTCTGGACGGATGCCGAATATAAAAGCCTGCG
GGAACACTTGCAAAACAGCGGGGTTATGGACGGAGAAAAGCTGAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Bacillus subtilis subsp. subtilis str. 168

80.938

100

0.809

  recG/mmsA Streptococcus pneumoniae R6

49.037

98.974

0.485

  recG/mmsA Streptococcus pneumoniae R36A

49.037

98.974

0.485

  recG Neisseria meningitidis strain C311

39.445

95.161

0.375


Multiple sequence alignment