Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   EEB07_RS05175 Genome accession   NZ_CP033576
Coordinates   971582..973888 (-) Length   768 a.a.
NCBI ID   WP_123117417.1    Uniprot ID   -
Organism   Bacillus velezensis strain NY12-2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 966582..978888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EEB07_RS05135 (EEB07_05135) - 967042..967473 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  EEB07_RS05140 (EEB07_05140) - 967473..967814 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  EEB07_RS05145 (EEB07_05145) - 967807..969288 (+) 1482 WP_123117415.1 Na+/H+ antiporter subunit D -
  EEB07_RS05150 (EEB07_05150) - 969294..969770 (+) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  EEB07_RS05155 (EEB07_05155) - 969770..970054 (+) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  EEB07_RS05160 (EEB07_05160) mnhG 970038..970412 (+) 375 WP_123117416.1 monovalent cation/H(+) antiporter subunit G -
  EEB07_RS05165 (EEB07_05165) - 970452..970835 (-) 384 WP_017419422.1 hotdog fold thioesterase -
  EEB07_RS05170 (EEB07_05170) comA 970857..971501 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  EEB07_RS05175 (EEB07_05175) comP 971582..973888 (-) 2307 WP_123117417.1 sensor histidine kinase Regulator
  EEB07_RS05180 (EEB07_05180) comX 973907..974083 (-) 177 WP_017419424.1 competence pheromone ComX -
  EEB07_RS05185 (EEB07_05185) - 974098..974994 (-) 897 WP_017419425.1 polyprenyl synthetase family protein -
  EEB07_RS05190 (EEB07_05190) degQ 975125..975265 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  EEB07_RS05200 (EEB07_05200) - 975731..976072 (+) 342 WP_025285192.1 hypothetical protein -
  EEB07_RS05205 (EEB07_05205) - 976079..977302 (-) 1224 WP_123117418.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89374.73 Da        Isoelectric Point: 8.5978

>NTDB_id=324042 EEB07_RS05175 WP_123117417.1 971582..973888(-) (comP) [Bacillus velezensis strain NY12-2]
MKKFIRNFSIVLLFVSLFYVVHIIYFTQNGVLVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRGNSKIDLHNTEFISLNSSYSFFIYIIPCILFALSMLCIFYIYKVNRVKDTYSAYILIIFLLCTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYFHFLYQYFKELKLKFSAGYVVSTLYILPVINIIIEIFQKHFAFQLVTNIN
LVTFFLEMMVVYTSIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGQYIYSAIVTAPFLIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIIPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKIF
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEKGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=324042 EEB07_RS05175 WP_123117417.1 971582..973888(-) (comP) [Bacillus velezensis strain NY12-2]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGTTCATATTATATATTTTAC
TCAAAACGGAGTTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATAATAAGGGGTAATAGTAAAATAGACTTACATAATACTGAGTT
TATTTCCTTAAATAGCTCTTATAGTTTTTTTATCTATATTATCCCATGCATATTATTTGCTTTAAGCATGTTATGCATTT
TTTATATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTGATTATTTTTTTATTGTGTACATCCATT
GCATATTTAAGCGCAGGTGGAGTAACTAGAGGATATGAAATAAACAGATATATTAACCTTTTTACATTTTTGAACGTACC
TGTATTATACTTTCACTTTTTGTATCAATACTTTAAAGAATTAAAATTGAAATTTTCAGCTGGTTATGTTGTGTCTACTC
TCTATATATTGCCGGTTATTAATATAATAATCGAGATATTCCAGAAGCATTTTGCCTTCCAACTTGTTACGAATATTAAT
TTAGTAACATTTTTTTTGGAAATGATGGTCGTCTATACATCCATTATTTTTTATGGACTAGTCTACCGAAAAAAGGATCA
CTTTTATTTGCTGAAAGTGTTACTTATATCTAATACCATAGCCTTTTTTCCGTTTACAGTATTTTATATTATACCTGAGG
TGTTGTTCGGACAGTATATTTATTCTGCTATAGTTACGGCACCATTTTTAATAATTATTCCATTAGCTTTAGTCTATCAA
TTCGTGGTCAATAAAATCTACGATATAGACTTCTTGTTGGGCAGAATCAGGTACTATGGTTTCCTTTCCATTATTCCGAC
TATTGGAGTTGTATGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGCAAGATTTTT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAACTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAAAAGGCGGCGGCCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.144

100

0.594

Multiple sequence alignment