Detailed information
Bioinformatically predicted
Overview
| Name | degS | Type | Regulator |
| Locus tag | D5285_RS19925 | Genome accession | NZ_CP033389 |
| Coordinates | 3872971..3874128 (-) | Length | 385 a.a. |
| NCBI ID | WP_020453119.1 | Uniprot ID | A0A6I7TVP7 |
| Organism | Bacillus paralicheniformis strain CBMAI 1303 | ||
| Function | phosphorylation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3867971..3879128
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5285_RS19895 (D5285_19895) | - | 3868209..3868628 (-) | 420 | WP_020453114.1 | TIGR03826 family flagellar region protein | - |
| D5285_RS19900 (D5285_19900) | comFC | 3868687..3869424 (-) | 738 | WP_026580174.1 | ComF family protein | Machinery gene |
| D5285_RS19905 (D5285_19905) | - | 3869381..3869665 (-) | 285 | WP_020453116.1 | late competence development ComFB family protein | - |
| D5285_RS19910 (D5285_19910) | comFA | 3869720..3871114 (-) | 1395 | WP_020453117.1 | DEAD/DEAH box helicase | Machinery gene |
| D5285_RS19915 (D5285_19915) | - | 3871238..3872080 (-) | 843 | WP_020453118.1 | DegV family protein | - |
| D5285_RS19920 (D5285_19920) | degU | 3872200..3872889 (-) | 690 | WP_003185730.1 | two-component system response regulator DegU | Regulator |
| D5285_RS19925 (D5285_19925) | degS | 3872971..3874128 (-) | 1158 | WP_020453119.1 | histidine kinase | Regulator |
| D5285_RS19930 (D5285_19930) | - | 3874351..3874989 (+) | 639 | WP_020453120.1 | YigZ family protein | - |
| D5285_RS19935 (D5285_19935) | - | 3875004..3876083 (+) | 1080 | WP_020453121.1 | LCP family protein | - |
| D5285_RS19940 (D5285_19940) | - | 3876136..3876519 (-) | 384 | WP_020453122.1 | hypothetical protein | - |
| D5285_RS19945 (D5285_19945) | - | 3876628..3877692 (-) | 1065 | WP_020453123.1 | glycosyltransferase family 4 protein | - |
| D5285_RS19950 (D5285_19950) | - | 3877823..3879010 (-) | 1188 | WP_228119611.1 | glycosyltransferase family 1 protein | - |
Sequence
Protein
Download Length: 385 a.a. Molecular weight: 44650.34 Da Isoelectric Point: 6.7862
>NTDB_id=323593 D5285_RS19925 WP_020453119.1 3872971..3874128(-) (degS) [Bacillus paralicheniformis strain CBMAI 1303]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL
Nucleotide
Download Length: 1158 bp
>NTDB_id=323593 D5285_RS19925 WP_020453119.1 3872971..3874128(-) (degS) [Bacillus paralicheniformis strain CBMAI 1303]
GTGAGTGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGATGGGAGCAAGGA
TGAGGTCTTTCAAATCGGAGAGCAGTCCCGTCAGCAATATGAAGGCTTGGTAGAAGAGCTGAAGCAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGAAACCGCTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGCCAGATTACCGTCGTCTTAAACTATTTAAATCAGGATCTGCGCCAGGTTGGCGTTCTCCTA
GAAGATGCGCAGGCCAAACAGGATTTCGGACTGCGGATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGCCCTGCGCAAATGCTGGCCAACGTCATGATGAGATCTGAGCTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAGAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATCCATTTCCAATGCATCGGAGAATCCGAAGATAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TTTTCCGGCTTGCACAGGAAGCAGTGACAAACGCCTTAAAACACTCCGAATCAACTGAGATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGTTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTTAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGTTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATTTTGATTAAAGTTCCGCTGTCTTTGTAA
GTGAGTGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGATGGGAGCAAGGA
TGAGGTCTTTCAAATCGGAGAGCAGTCCCGTCAGCAATATGAAGGCTTGGTAGAAGAGCTGAAGCAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGAAACCGCTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGCCAGATTACCGTCGTCTTAAACTATTTAAATCAGGATCTGCGCCAGGTTGGCGTTCTCCTA
GAAGATGCGCAGGCCAAACAGGATTTCGGACTGCGGATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGCCCTGCGCAAATGCTGGCCAACGTCATGATGAGATCTGAGCTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAGAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATCCATTTCCAATGCATCGGAGAATCCGAAGATAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TTTTCCGGCTTGCACAGGAAGCAGTGACAAACGCCTTAAAACACTCCGAATCAACTGAGATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGTTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTTAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGTTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATTTTGATTAAAGTTCCGCTGTCTTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degS | Bacillus subtilis subsp. subtilis str. 168 |
89.351 |
100 |
0.894 |