Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   D5285_RS17990 Genome accession   NZ_CP033389
Coordinates   3498067..3499686 (-) Length   539 a.a.
NCBI ID   WP_122934983.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain CBMAI 1303     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3493067..3504686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D5285_RS17950 (D5285_17950) - 3493532..3493963 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  D5285_RS17955 (D5285_17955) - 3493963..3494304 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  D5285_RS17960 (D5285_17960) - 3494297..3495775 (+) 1479 WP_020452786.1 Na+/H+ antiporter subunit D -
  D5285_RS17965 (D5285_17965) - 3495781..3496257 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  D5285_RS17970 (D5285_17970) - 3496257..3496541 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  D5285_RS17975 (D5285_17975) mnhG 3496525..3496899 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  D5285_RS17980 (D5285_17980) - 3496936..3497325 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  D5285_RS17985 (D5285_17985) comA 3497342..3497980 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  D5285_RS17990 (D5285_17990) comP 3498067..3499686 (-) 1620 WP_122934983.1 sensor histidine kinase Regulator
  D5285_RS17995 (D5285_17995) - 3499826..3500536 (-) 711 WP_183163973.1 hypothetical protein -
  D5285_RS18000 (D5285_18000) comX 3500665..3500835 (-) 171 WP_020452790.1 competence pheromone ComX -
  D5285_RS18005 (D5285_18005) - 3500807..3501718 (-) 912 WP_020452791.1 polyprenyl synthetase family protein -
  D5285_RS18010 (D5285_18010) degQ 3501905..3502045 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  D5285_RS18020 (D5285_18020) - 3502531..3502878 (+) 348 WP_223254849.1 hypothetical protein -
  D5285_RS18025 (D5285_18025) - 3502921..3504141 (-) 1221 WP_020452793.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 539 a.a.        Molecular weight: 62385.40 Da        Isoelectric Point: 6.7035

>NTDB_id=323584 D5285_RS17990 WP_122934983.1 3498067..3499686(-) (comP) [Bacillus paralicheniformis strain CBMAI 1303]
MIRIPLKSINLLSFFISTVIVFILITYALIKFKYSQQSYLLKILMLMNFIALVPFLFFYVLPMLVFGDYIFSAIVVSPFL
LLIPLSLVYQFMSNKIYDIEFLIGRLKYYSFLAIIPTSLIITILAIVKHQEGEFFTVQVTIFTYLIMVGVFYLKEIIDFR
FRLKRFSEKFNYQDSIFKFTQTIRTFTSLNQVLMELKQIVLDVLLVNNIYMLKVKNDGSVSMLENDAEEKPWIPYEQEVT
KVITDIGKIVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEG
PNPAWLNKLMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQ
ELRPQLLYDLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKE
KVVLHYEDDGIGFDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 1620 bp        

>NTDB_id=323584 D5285_RS17990 WP_122934983.1 3498067..3499686(-) (comP) [Bacillus paralicheniformis strain CBMAI 1303]
ATAATCCGAATACCCCTAAAAAGTATTAACTTATTGTCGTTCTTTATTTCGACGGTTATTGTTTTTATTCTGATTACATA
TGCCTTAATTAAATTCAAGTATTCTCAACAGTCCTACTTATTGAAAATATTAATGTTGATGAACTTCATTGCATTGGTAC
CTTTTTTGTTTTTCTATGTACTTCCTATGCTGGTCTTTGGCGATTATATTTTCTCGGCCATTGTTGTGTCCCCGTTTCTG
TTGCTGATTCCTTTATCTTTGGTATATCAATTTATGTCTAATAAAATATATGATATTGAATTTTTAATTGGTCGATTGAA
ATATTATAGTTTTTTAGCGATAATTCCAACTTCTTTAATTATTACTATTTTAGCCATTGTTAAGCATCAAGAAGGAGAAT
TTTTCACAGTACAGGTTACAATCTTTACATATCTTATCATGGTAGGCGTTTTCTATTTAAAAGAAATTATTGATTTTCGC
TTTCGGCTAAAGCGCTTTTCAGAAAAATTTAACTACCAGGATAGTATTTTTAAATTTACTCAAACCATTCGAACATTTAC
GTCTTTAAATCAAGTTTTAATGGAGTTAAAACAAATCGTTTTGGACGTGCTTCTTGTTAATAATATTTATATGCTCAAAG
TAAAAAACGATGGATCGGTATCGATGCTAGAGAATGATGCAGAAGAAAAACCGTGGATCCCGTACGAACAAGAAGTAACC
AAGGTCATCACCGACATCGGCAAAATCGTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTC
TTATGTCATGCTGTGTTTGTCGGTTTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGT
TTTATACGAGTGTTTCCCTGGAAAACGTCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGG
CCGAATCCGGCGTGGCTGAATAAATTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGA
TTCTGTGCTGCAGGACATGATTTCCTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTA
CGAATCAAATCAGGCAAAGGCTCATCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAG
GAGCTGAGGCCGCAGCTGTTGTACGATCTCGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTC
ATCGATCGATAAGATCCGCCTCAATACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAA
TTGTGCAGGAGCTTTTAAGCAATGCGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAA
AAAGTTGTTCTTCATTATGAAGATGACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCT
GTCGGGTATTCGCGAGCGAGTCCGCGCGCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCG
CCATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(450-537)

Histidine kinase (HisKA_3)

(338-407)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

60.187

99.258

0.597

Multiple sequence alignment