Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   FDP16_RS00660 Genome accession   NZ_CP040798
Coordinates   121369..121809 (-) Length   146 a.a.
NCBI ID   WP_176798196.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain CGMH058     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 116369..126809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDP16_RS00640 (FDP16_00660) argR 116898..117335 (+) 438 WP_072074757.1 arginine repressor -
  FDP16_RS00645 (FDP16_00665) hexA 117413..119962 (+) 2550 WP_176798193.1 DNA mismatch repair protein MutS Machinery gene
  FDP16_RS00650 (FDP16_00670) tnpA 120156..120620 (+) 465 WP_176798194.1 IS200/IS605 family transposase -
  FDP16_RS00655 (FDP16_00675) - 120902..121372 (-) 471 WP_176798195.1 DUF3021 family protein -
  FDP16_RS00660 (FDP16_00680) brsR 121369..121809 (-) 441 WP_176798196.1 LytTR family DNA-binding domain-containing protein Regulator
  FDP16_RS00665 (FDP16_00685) hexB 121994..123937 (+) 1944 WP_176798197.1 DNA mismatch repair endonuclease MutL Machinery gene
  FDP16_RS00670 (FDP16_00690) - 123973..124494 (-) 522 WP_176798198.1 RDD family protein -
  FDP16_RS00675 (FDP16_00695) - 124478..124981 (-) 504 WP_176798199.1 helix-turn-helix domain-containing protein -
  FDP16_RS00680 (FDP16_00700) ruvA 125150..125740 (+) 591 WP_176798200.1 Holliday junction branch migration protein RuvA Machinery gene
  FDP16_RS00685 (FDP16_00705) - 125750..126322 (+) 573 WP_176798201.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17274.93 Da        Isoelectric Point: 9.8891

>NTDB_id=323255 FDP16_RS00660 WP_176798196.1 121369..121809(-) (brsR) [Streptococcus sanguinis strain CGMH058]
MKVKLRIDSQVTEDSVSIEARLMTENIQELVHFAQHLGKEDKIHVKKEDQIYLLDTKEILRIYTENRQVRVRTAKDGYRA
QQALYQLLQVLPDYFLQISQSEIINSRQISHLKLTPNGMIQIFLKNGDQTYSSRRYLKSIKERLQL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=323255 FDP16_RS00660 WP_176798196.1 121369..121809(-) (brsR) [Streptococcus sanguinis strain CGMH058]
ATGAAAGTTAAGCTAAGAATCGATTCTCAAGTCACCGAGGACTCCGTTAGCATTGAGGCCCGCCTCATGACAGAAAATAT
TCAGGAATTGGTCCACTTTGCTCAACATCTAGGCAAAGAGGATAAGATTCATGTCAAGAAAGAGGATCAAATCTATCTGC
TGGACACTAAGGAAATCCTCCGAATCTATACAGAAAATCGGCAGGTTCGGGTCCGAACGGCAAAAGATGGCTATCGAGCT
CAACAAGCTCTTTATCAGTTGCTGCAGGTCCTGCCGGACTATTTCCTGCAGATTTCTCAGTCGGAAATTATCAACAGCCG
ACAAATCAGCCATCTCAAACTGACTCCAAATGGTATGATTCAAATATTTCTGAAAAACGGCGACCAGACTTACTCGTCCC
GCCGTTATCTCAAATCTATCAAAGAAAGGTTGCAATTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(49-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.986

100

0.37