Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FGE23_RS09140 Genome accession   NZ_CP040672
Coordinates   1795523..1797337 (+) Length   604 a.a.
NCBI ID   WP_146276356.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain X030     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1790523..1802337
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGE23_RS09125 - 1791307..1792068 (+) 762 WP_007408530.1 MurR/RpiR family transcriptional regulator -
  FGE23_RS09130 - 1792085..1793671 (+) 1587 WP_146276354.1 alpha-glucoside-specific PTS transporter subunit IIBC -
  FGE23_RS09135 - 1793809..1795542 (+) 1734 WP_025650245.1 ABC transporter ATP-binding protein -
  FGE23_RS09140 rcrQ 1795523..1797337 (+) 1815 WP_146276356.1 ABC transporter ATP-binding protein Regulator
  FGE23_RS09145 - 1797504..1797908 (+) 405 WP_014304646.1 DoxX family protein -
  FGE23_RS09150 - 1797925..1798782 (+) 858 WP_146276358.1 VOC family protein -
  FGE23_RS09160 cyoE 1799160..1800107 (+) 948 WP_070081515.1 heme o synthase -
  FGE23_RS09165 - 1800145..1800696 (-) 552 WP_012117104.1 PadR family transcriptional regulator -
  FGE23_RS09170 - 1800929..1801531 (+) 603 WP_070081516.1 NAD(P)H-dependent oxidoreductase -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67461.17 Da        Isoelectric Point: 9.5659

>NTDB_id=323060 FGE23_RS09140 WP_146276356.1 1795523..1797337(+) (rcrQ) [Bacillus amyloliquefaciens strain X030]
MEKDIRKPFRYPKIPLKSNEGRKRAKAKDTKGTLRRIWSYVAEKKGLLTLVIIMVVISAIFGLLGPFVIGKAIDHFIVVR
TTDGLAGVLFLLFGIYLVQSLSLWFQNYWMINISQSTVFKMRSELFTHLHELPIPFFDKQRLGDLMSRVTNDIENVSSTL
NTSVIQVLSSVITFVGTIAVMLYMSPLLTLITLLIIPIMLLSIKWITNRTGLLFKQQQKNLGELNGFIEESISGAKVIKA
YSREDRVMEQFLEKNAALQSSGFWAQTISGFIPKVMNSLNNLSFTIIAAVGGLFALKGWISIGSIVVFAEYSRQFTRPLN
DLANQFNTMLSAIAGAERVFDVLDEKEEREDEEHATHQPIKTGEIEFRDVSFGYQEDSLILKHLSFSVPKGQSIAFVGPT
GAGKTTVTSLIARFYEPNNGKILIDGTDIKKLTRSSLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKAANA
HGFIERLPKGYDTVLTQNGAGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVKIQEALGRLMAGRTSVIIAHRL
NTIQKADQILVLKDGEMAEKGTHAELLSQNGFYRELYESQFRES

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=323060 FGE23_RS09140 WP_146276356.1 1795523..1797337(+) (rcrQ) [Bacillus amyloliquefaciens strain X030]
GTGGAGAAAGACATTCGTAAACCTTTCCGATATCCGAAAATACCGCTCAAATCGAATGAAGGCAGAAAACGCGCGAAAGC
AAAAGATACAAAAGGCACGCTGCGCAGAATCTGGTCGTATGTAGCCGAGAAAAAAGGGCTTTTAACCCTTGTGATCATCA
TGGTAGTCATAAGCGCCATATTCGGCCTGCTCGGACCGTTCGTCATCGGGAAAGCAATTGATCATTTTATCGTCGTACGG
ACGACGGACGGATTGGCGGGGGTGCTGTTCTTGCTGTTTGGGATTTACCTCGTGCAATCATTGTCCTTATGGTTTCAAAA
CTATTGGATGATCAATATTTCGCAAAGCACCGTGTTTAAAATGCGGAGCGAACTGTTCACCCATCTGCATGAGCTGCCGA
TACCGTTTTTTGATAAACAGCGCCTCGGCGACTTGATGAGCCGGGTTACCAATGATATCGAAAATGTCAGCTCCACTTTA
AATACATCCGTCATTCAAGTGCTGTCGAGCGTCATTACATTCGTCGGCACAATCGCCGTCATGCTGTACATGAGTCCGCT
TTTAACATTGATCACGCTTTTGATTATTCCGATCATGCTTTTGAGCATTAAATGGATCACCAATCGGACGGGACTCCTGT
TTAAGCAGCAGCAGAAAAACCTCGGCGAGCTGAACGGTTTTATTGAAGAGTCGATATCAGGAGCGAAGGTCATTAAAGCC
TATTCGAGGGAAGACCGCGTCATGGAGCAATTTTTAGAAAAAAACGCGGCGTTACAATCATCAGGGTTTTGGGCGCAGAC
AATTTCGGGATTCATTCCGAAAGTCATGAACTCTTTAAACAATTTAAGCTTTACGATTATAGCGGCGGTCGGCGGGCTGT
TTGCGCTGAAGGGGTGGATTTCGATCGGTTCCATCGTCGTATTCGCAGAATACTCGCGGCAGTTCACGCGCCCTTTAAAT
GATTTAGCCAATCAGTTCAATACGATGTTATCGGCCATCGCCGGGGCTGAACGGGTGTTTGACGTGCTGGATGAAAAAGA
GGAGCGGGAAGATGAAGAGCATGCGACGCACCAGCCGATCAAAACGGGAGAGATTGAATTCCGAGATGTCTCCTTCGGCT
ATCAGGAAGACAGCCTGATCTTAAAACATCTGTCCTTCAGCGTTCCGAAAGGACAGTCAATCGCCTTCGTCGGACCGACC
GGAGCGGGTAAAACGACCGTTACGAGCCTGATCGCCCGCTTTTACGAGCCGAATAACGGGAAAATCCTCATCGACGGAAC
GGACATCAAAAAACTGACGAGATCCAGTCTGAGAAAAAACATGGGGTTTGTCCTGCAGGATTCCTTTCTCTTTCAGGGCA
CCATCAGGGAAAATATCCGTTACGGCCGTCTGGATGCATCTGACCAAGAGGTGGAGGCAGCCGCAAAAGCCGCCAATGCC
CACGGATTCATCGAACGGCTCCCGAAAGGCTACGATACCGTCCTTACCCAAAACGGCGCGGGCATCAGCCAAGGACAAAA
ACAGCTTATTTCCATCGCGAGAGCTGTGCTGGCGGACCCTGTGCTGCTCATTTTGGATGAAGCGACGAGCAACATTGATA
CGGTGACGGAAGTGAAAATACAAGAAGCGCTCGGCCGTTTAATGGCGGGCAGAACAAGCGTCATCATCGCTCACAGGCTG
AACACGATTCAAAAAGCCGATCAGATTCTTGTGCTGAAAGACGGCGAAATGGCTGAAAAAGGAACCCATGCCGAACTGCT
CAGCCAGAACGGGTTTTACCGGGAATTATATGAAAGCCAGTTCCGGGAATCATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(48-319)

ABC transporter (ABC_tran)

(381-530)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.593

96.523

0.373

Multiple sequence alignment