Detailed information
Bioinformatically predicted
Overview
| Name | degS | Type | Regulator |
| Locus tag | D9Y32_RS09420 | Genome accession | NZ_CP033218 |
| Coordinates | 1860910..1862067 (+) | Length | 385 a.a. |
| NCBI ID | WP_003185733.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain TCCC 11148 | ||
| Function | phosphorylation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1855910..1867067
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9Y32_RS09395 (D9Y32_09405) | - | 1856012..1857193 (+) | 1182 | WP_011198354.1 | glycosyltransferase family 1 protein | - |
| D9Y32_RS09400 (D9Y32_09410) | - | 1857324..1858388 (+) | 1065 | WP_003185739.1 | glycosyltransferase family 4 protein | - |
| D9Y32_RS09405 (D9Y32_09415) | - | 1858508..1858882 (+) | 375 | WP_003185738.1 | hypothetical protein | - |
| D9Y32_RS09410 (D9Y32_09420) | - | 1858967..1860043 (-) | 1077 | WP_003185737.1 | LCP family protein | - |
| D9Y32_RS09415 (D9Y32_09425) | - | 1860058..1860696 (-) | 639 | WP_142782350.1 | YigZ family protein | - |
| D9Y32_RS09420 (D9Y32_09430) | degS | 1860910..1862067 (+) | 1158 | WP_003185733.1 | histidine kinase | Regulator |
| D9Y32_RS09425 (D9Y32_09435) | degU | 1862149..1862838 (+) | 690 | WP_003185730.1 | two-component system response regulator DegU | Regulator |
| D9Y32_RS09430 (D9Y32_09440) | - | 1862958..1863800 (+) | 843 | WP_003185726.1 | DegV family protein | - |
| D9Y32_RS09435 (D9Y32_09445) | comFA | 1863921..1865315 (+) | 1395 | WP_003185720.1 | DEAD/DEAH box helicase | Machinery gene |
| D9Y32_RS09440 (D9Y32_09450) | - | 1865370..1865654 (+) | 285 | WP_003185718.1 | late competence development ComFB family protein | - |
| D9Y32_RS09445 (D9Y32_09455) | comFC | 1865611..1866345 (+) | 735 | WP_011198352.1 | amidophosphoribosyltransferase | Machinery gene |
| D9Y32_RS09450 (D9Y32_09460) | - | 1866404..1866823 (+) | 420 | WP_003185715.1 | TIGR03826 family flagellar region protein | - |
Sequence
Protein
Download Length: 385 a.a. Molecular weight: 44636.36 Da Isoelectric Point: 6.7863
>NTDB_id=322714 D9Y32_RS09420 WP_003185733.1 1860910..1862067(+) (degS) [Bacillus licheniformis strain TCCC 11148]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL
Nucleotide
Download Length: 1158 bp
>NTDB_id=322714 D9Y32_RS09420 WP_003185733.1 1860910..1862067(+) (degS) [Bacillus licheniformis strain TCCC 11148]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATTCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATTCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degS | Bacillus subtilis subsp. subtilis str. 168 |
89.351 |
100 |
0.894 |