Detailed information NTG0321654

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CDG68_RS10890
• Genome accession: NZ_CP033133
• Coordinates: 1688384..1688995 (+)
• Length: 203 a.a.
• NCBI ID: WP_087553050.1
• Uniprot ID: -
• Organism: Acinetobacter wuhouensis strain WCHAW010062
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1683384..1693995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG68_RS10855 (CDG68_10860)	kdsB	1683702..1684463 (+)	762	WP_087553057.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CDG68_RS10860 (CDG68_10865)	-	1684540..1685520 (+)	981	WP_087553056.1	DNA polymerase III subunit delta'	-
CDG68_RS10865 (CDG68_10870)	-	1685558..1685899 (+)	342	WP_087553055.1	PilZ domain-containing protein	-
CDG68_RS10870 (CDG68_10875)	-	1685938..1686711 (+)	774	WP_087553054.1	TatD family hydrolase	-
CDG68_RS10875 (CDG68_10880)	-	1686783..1687397 (+)	615	WP_087553053.1	TetR/AcrR family transcriptional regulator	-
CDG68_RS10880 (CDG68_10885)	-	1687403..1687969 (+)	567	WP_087553052.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
CDG68_RS10885 (CDG68_10890)	xcpV	1687956..1688336 (+)	381	WP_087553051.1	type II secretion system minor pseudopilin GspI	Machinery gene
CDG68_RS10890 (CDG68_10895)	xcpW	1688384..1688995 (+)	612	WP_087553050.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CDG68_RS10895 (CDG68_10900)	gspK	1689045..1690007 (+)	963	WP_087553049.1	type II secretion system minor pseudopilin GspK	-
CDG68_RS10900 (CDG68_10905)	-	1690231..1690827 (+)	597	WP_087553048.1	6-pyruvoyl trahydropterin synthase family protein	-
CDG68_RS10905 (CDG68_10910)	ung	1690900..1691613 (+)	714	WP_068973184.1	uracil-DNA glycosylase	-
CDG68_RS10910 (CDG68_10915)	-	1691610..1692731 (+)	1122	WP_068973183.1	enoyl-CoA hydratase/isomerase family protein	-
CDG68_RS10915 (CDG68_10920)	tadA	1692737..1693279 (+)	543	WP_087553047.1	tRNA adenosine(34) deaminase TadA	-
CDG68_RS10920 (CDG68_10925)	-	1693386..1693817 (+)	432	WP_087553046.1	SRPBCC family protein	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 23377.60 Da
• Isoelectric Point: 5.1125

>NTDB_id=321654 CDG68_RS10890 WP_087553050.1 1688384..1688995(+) (xcpW) [Acinetobacter wuhouensis strain WCHAW010062]
MQKKSGFTLVELLVAIAIFAVLSALGWKVFDYLIKVKDRNAMHEENLGQLQGAYQQIQRDTLQIVPVSARNGDEIEPALS
LDNQKLAFSKSGVSDPLKQGLSPYERVEYVYNGQDKKIYRLKYSNLNRIRSDQPLSSVLLSDVDQYQIQILNPNETDRWP
DGDIKDERQLPRGILMKVTIRDVEYEWVLSLLNTDYLQDKKDN

Nucleotide

• Length: 612 bp

>NTDB_id=321654 CDG68_RS10890 WP_087553050.1 1688384..1688995(+) (xcpW) [Acinetobacter wuhouensis strain WCHAW010062]
ATGCAAAAAAAATCAGGTTTTACACTGGTTGAACTACTGGTTGCGATCGCTATTTTCGCTGTACTTTCTGCACTCGGTTG
GAAAGTGTTTGATTATCTGATTAAAGTCAAAGATCGTAATGCAATGCATGAAGAAAATCTTGGGCAACTACAGGGCGCAT
ATCAACAAATACAACGTGATACATTGCAAATTGTGCCTGTTTCTGCACGAAATGGTGATGAAATTGAACCTGCCTTGAGT
CTAGATAATCAGAAATTAGCATTTAGTAAATCAGGTGTTTCTGATCCATTGAAGCAAGGTTTATCGCCCTATGAGCGTGT
GGAATATGTATATAATGGACAGGATAAGAAAATATATCGCTTAAAATATTCAAATTTAAATCGAATTCGTTCAGATCAGC
CTTTGTCGAGTGTTTTACTTTCCGATGTGGATCAATATCAAATTCAAATTTTAAATCCCAATGAGACTGATCGCTGGCCT
GATGGGGATATAAAAGACGAGAGACAACTGCCACGCGGGATTTTGATGAAAGTCACAATTCGGGATGTTGAATATGAGTG
GGTATTGAGTTTGCTCAATACAGATTATTTGCAGGATAAAAAGGATAATTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (57-184)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	61.224	96.552	0.591