Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | D9C22_RS13090 | Genome accession | NZ_CP033064 |
| Coordinates | 2511256..2511591 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus sp. WR11 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2506256..2516591
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C22_RS13070 (D9C22_13080) | gcvT | 2506849..2507937 (-) | 1089 | WP_041850013.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| D9C22_RS13075 (D9C22_13085) | - | 2508378..2510051 (+) | 1674 | WP_041850014.1 | SNF2-related protein | - |
| D9C22_RS13080 (D9C22_13090) | - | 2510072..2510866 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| D9C22_RS13085 (D9C22_13095) | sinI | 2511049..2511222 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| D9C22_RS13090 (D9C22_13100) | sinR | 2511256..2511591 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| D9C22_RS13095 (D9C22_13105) | tasA | 2511684..2512469 (-) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| D9C22_RS13100 (D9C22_13110) | - | 2512533..2513105 (-) | 573 | WP_003246088.1 | signal peptidase I | - |
| D9C22_RS13105 (D9C22_13115) | tapA | 2513089..2513850 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| D9C22_RS13110 (D9C22_13120) | - | 2514122..2514448 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| D9C22_RS13115 (D9C22_13125) | - | 2514490..2514669 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| D9C22_RS13120 (D9C22_13130) | comGG | 2514740..2515114 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| D9C22_RS13125 (D9C22_13135) | comGF | 2515115..2515498 (-) | 384 | WP_041850015.1 | ComG operon protein ComGF | Machinery gene |
| D9C22_RS13130 (D9C22_13140) | comGE | 2515524..2515871 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| D9C22_RS13135 (D9C22_13145) | comGD | 2515855..2516286 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| D9C22_RS13140 (D9C22_13150) | comGC | 2516276..2516572 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=321071 D9C22_RS13090 WP_003226345.1 2511256..2511591(+) (sinR) [Bacillus sp. WR11]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=321071 D9C22_RS13090 WP_003226345.1 2511256..2511591(+) (sinR) [Bacillus sp. WR11]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |