Detailed information NTG0032107

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: LLKF_RS10830
• Genome accession: NC_013656
• Coordinates: 2225809..2226885 (+)
• Length: 358 a.a.
• NCBI ID: WP_010906242.1
• Uniprot ID: Q9CE70
• Organism: Lactococcus lactis subsp. lactis KF147
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2220809..2231885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLKF_RS10805 (LLKF_2154)	pgsA	2220969..2221541 (-)	573	WP_012898490.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LLKF_RS10810 (LLKF_2155)	-	2221582..2222478 (-)	897	WP_004254758.1	helix-turn-helix domain-containing protein	-
LLKF_RS10815 (LLKF_2156)	yfmH	2222690..2223973 (-)	1284	WP_004254752.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
LLKF_RS10820 (LLKF_2157)	yfmF	2223963..2225249 (-)	1287	WP_023164564.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
LLKF_RS10825 (LLKF_2158)	yaaA	2225447..2225809 (+)	363	WP_012898492.1	S4 domain-containing protein YaaA	-
LLKF_RS10830 (LLKF_2159)	recF	2225809..2226885 (+)	1077	WP_010906242.1	DNA replication/repair protein RecF	Machinery gene
LLKF_RS10835 (LLKF_2160)	-	2226972..2227340 (-)	369	WP_012898493.1	carboxymuconolactone decarboxylase family protein	-
LLKF_RS10840 (LLKF_2161)	-	2227417..2227794 (+)	378	WP_012898494.1	MerR family transcriptional regulator	-
LLKF_RS10845 (LLKF_2162)	-	2227806..2228753 (-)	948	WP_012898495.1	alpha/beta hydrolase	-
LLKF_RS10850 (LLKF_2163)	galE	2228872..2229852 (-)	981	WP_038603738.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41356.23 Da
• Isoelectric Point: 6.8652

>NTDB_id=32107 LLKF_RS10830 WP_010906242.1 2225809..2226885(+) (recF) [Lactococcus lactis subsp. lactis KF147]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=32107 LLKF_RS10830 WP_010906242.1 2225809..2226885(+) (recF) [Lactococcus lactis subsp. lactis KF147]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCATCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTTACTCGTAGTCACAGAA
CAAGTCACGATAAAGAGCTCATTTCTTGGTCGCAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTGGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTATTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATCAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

3D structure

• AlphaFold DB: Q9CE70

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447