Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | PCC8801_RS03540 | Genome accession | NC_011726 |
| Coordinates | 744533..747175 (-) | Length | 880 a.a. |
| NCBI ID | WP_012594080.1 | Uniprot ID | B7JXP7 |
| Organism | Rippkaea orientalis PCC 8801 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 739533..752175
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCC8801_RS03510 (PCC8801_0713) | rpsF | 739614..739988 (+) | 375 | WP_012594073.1 | 30S ribosomal protein S6 | - |
| PCC8801_RS23435 (PCC8801_0714) | - | 740245..740382 (+) | 138 | WP_012594074.1 | hypothetical protein | - |
| PCC8801_RS03515 (PCC8801_0715) | aroQ | 740399..740860 (+) | 462 | WP_012594075.1 | type II 3-dehydroquinate dehydratase | - |
| PCC8801_RS03520 (PCC8801_0716) | - | 740866..741603 (-) | 738 | WP_012594076.1 | ABC transporter ATP-binding protein | - |
| PCC8801_RS03525 (PCC8801_0717) | - | 741668..741895 (-) | 228 | WP_012594077.1 | indolepyruvate ferredoxin oxidoreductase subunit alpha | - |
| PCC8801_RS03530 (PCC8801_0718) | - | 742066..742293 (+) | 228 | WP_012594078.1 | hypothetical protein | - |
| PCC8801_RS03535 (PCC8801_0719) | - | 742313..744247 (-) | 1935 | WP_012594079.1 | S9 family peptidase | - |
| PCC8801_RS03540 (PCC8801_0720) | pilJ | 744533..747175 (-) | 2643 | WP_012594080.1 | methyl-accepting chemotaxis protein | Machinery gene |
| PCC8801_RS03545 (PCC8801_0721) | - | 747261..747791 (-) | 531 | WP_012594081.1 | chemotaxis protein CheW | - |
| PCC8801_RS03550 (PCC8801_0722) | pilH | 747839..748204 (-) | 366 | WP_012594082.1 | response regulator | Machinery gene |
| PCC8801_RS03555 (PCC8801_0723) | - | 748657..749874 (-) | 1218 | WP_012594083.1 | response regulator | - |
| PCC8801_RS03560 (PCC8801_0724) | hmpF | 750184..751791 (+) | 1608 | WP_012594084.1 | pilus motility taxis protein HmpF | - |
| PCC8801_RS03565 (PCC8801_0725) | - | 751825..752034 (+) | 210 | WP_012594085.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 880 a.a. Molecular weight: 95373.62 Da Isoelectric Point: 4.1274
>NTDB_id=32107 PCC8801_RS03540 WP_012594080.1 744533..747175(-) (pilJ) [Rippkaea orientalis PCC 8801]
MAPGTDYSKLYNQAYVAYGQGEYEEAATLIEPMAEAYSQDPHVLLLRGHIHLSLQQYETACADYQSVLTLTDQQDLLKLA
QQGLAQAQEMLGQASPNNLNHSQKSASYLGSSSLNDEDEDEEDGLIWQDNEEGEADWDSNFQIDENLDWDFDEEDFGEPT
IGHDPSQANPFDNAGQTTFRPPQADVASLAVEDDLNLETPDTWQSPFTEAMEDFPFTDDEDLRTEPHPTASVGKNTFLVT
PKLDNSRENPEGTPIESFLRPSSRNLLNYNSDEDLTLPPSSSSMGNQENQLVENLDSDLSHLTEMAAELPDSDIFTRSAE
VFSDNLSLDASDLMSAAPTPTTVTWVKPNEAMGGDLSVASNQGIKPTVEVAQQGWAAWFINASLKHKPWIAAGATGIASF
LMVLLVSTFTSVMSPKPQSGTTPVPQTSQSTPKPQNNQKPAAKATNKPSAAKSGSPVLLMALLGGLTGFSTTLLFSFLIC
GQVKRTIEDLQAQFDAMYAGDFNVKATIHSSDELGQLSLSFNQLARIILTTTSEAQQRAAETEQAQEDLTRQVIRLLDDV
EGAARGDLTVEAVVTADVLGAVADAFNLTIQNLREIVGQVKQAAKQVNKGSTDSESFARNNSSDALRMAEELAVTLNSVQ
VMTESIQRVAENAREAEEVASVSSVTALKGGEAVERTVAGILGIRETVSDTTRKVKRLAEASQEISKIVALISQIASRTN
LLALNASIQAARAGEAGRGFAIVADEVRQLADRSAKSLKEIEQIVLQIQSETGSVMTAMEEGIQQVINLVDTSEQAKRSL
EDIIDVSNRINGLVRSITADTVKQRENSRAVTQVMQSVELTAQEASQESQRVAGSLQTLVAISRDLLASVERFRVDKSET
MAPGTDYSKLYNQAYVAYGQGEYEEAATLIEPMAEAYSQDPHVLLLRGHIHLSLQQYETACADYQSVLTLTDQQDLLKLA
QQGLAQAQEMLGQASPNNLNHSQKSASYLGSSSLNDEDEDEEDGLIWQDNEEGEADWDSNFQIDENLDWDFDEEDFGEPT
IGHDPSQANPFDNAGQTTFRPPQADVASLAVEDDLNLETPDTWQSPFTEAMEDFPFTDDEDLRTEPHPTASVGKNTFLVT
PKLDNSRENPEGTPIESFLRPSSRNLLNYNSDEDLTLPPSSSSMGNQENQLVENLDSDLSHLTEMAAELPDSDIFTRSAE
VFSDNLSLDASDLMSAAPTPTTVTWVKPNEAMGGDLSVASNQGIKPTVEVAQQGWAAWFINASLKHKPWIAAGATGIASF
LMVLLVSTFTSVMSPKPQSGTTPVPQTSQSTPKPQNNQKPAAKATNKPSAAKSGSPVLLMALLGGLTGFSTTLLFSFLIC
GQVKRTIEDLQAQFDAMYAGDFNVKATIHSSDELGQLSLSFNQLARIILTTTSEAQQRAAETEQAQEDLTRQVIRLLDDV
EGAARGDLTVEAVVTADVLGAVADAFNLTIQNLREIVGQVKQAAKQVNKGSTDSESFARNNSSDALRMAEELAVTLNSVQ
VMTESIQRVAENAREAEEVASVSSVTALKGGEAVERTVAGILGIRETVSDTTRKVKRLAEASQEISKIVALISQIASRTN
LLALNASIQAARAGEAGRGFAIVADEVRQLADRSAKSLKEIEQIVLQIQSETGSVMTAMEEGIQQVINLVDTSEQAKRSL
EDIIDVSNRINGLVRSITADTVKQRENSRAVTQVMQSVELTAQEASQESQRVAGSLQTLVAISRDLLASVERFRVDKSET
Nucleotide
Download Length: 2643 bp
>NTDB_id=32107 PCC8801_RS03540 WP_012594080.1 744533..747175(-) (pilJ) [Rippkaea orientalis PCC 8801]
ATGGCACCCGGCACAGATTACAGCAAGTTATATAATCAAGCGTATGTCGCCTATGGACAGGGGGAGTACGAGGAGGCAGC
CACCTTAATTGAGCCGATGGCAGAAGCCTATAGTCAAGATCCTCATGTTCTGCTCTTGCGAGGCCATATTCACTTGAGCC
TTCAGCAGTATGAAACTGCCTGTGCCGACTATCAATCAGTCCTAACCCTAACGGATCAACAAGATTTACTCAAACTAGCC
CAGCAAGGGTTAGCCCAAGCACAAGAAATGTTAGGCCAAGCTAGTCCTAACAACCTCAATCATAGCCAAAAGTCAGCGAG
TTACCTAGGTTCATCTTCCTTGAACGATGAAGATGAAGACGAAGAAGATGGACTCATTTGGCAAGACAACGAAGAAGGAG
AAGCCGACTGGGATAGTAACTTCCAAATAGATGAAAATCTTGATTGGGACTTTGATGAGGAGGATTTTGGTGAACCAACC
ATTGGCCACGACCCATCCCAAGCCAATCCCTTTGATAATGCAGGACAAACCACCTTTAGGCCTCCCCAAGCAGACGTTGC
TTCCTTAGCCGTCGAGGATGACCTCAACTTAGAAACACCGGACACTTGGCAATCTCCCTTCACCGAAGCGATGGAAGACT
TCCCCTTCACTGATGATGAGGATCTCAGAACCGAACCCCATCCGACGGCGAGTGTGGGGAAAAACACCTTTTTAGTGACT
CCTAAATTGGATAACTCAAGAGAAAATCCTGAAGGCACACCCATAGAAAGCTTTTTACGTCCATCCTCTCGGAATTTGCT
CAATTATAATTCTGATGAAGACTTGACCCTGCCACCGAGTTCTTCGAGCATGGGCAATCAGGAAAATCAGCTTGTAGAGA
ATTTAGATAGCGATCTCTCCCATCTCACGGAGATGGCGGCAGAATTACCCGATTCTGACATCTTTACCCGTAGTGCAGAG
GTCTTTAGTGACAATCTCAGTTTAGATGCCTCTGACTTGATGAGTGCTGCTCCCACTCCAACCACAGTAACTTGGGTTAA
ACCCAATGAAGCCATGGGGGGTGATCTGAGTGTTGCCTCCAATCAAGGAATTAAACCCACCGTTGAAGTCGCACAACAAG
GATGGGCAGCTTGGTTTATTAATGCTTCTTTGAAGCATAAACCCTGGATCGCAGCAGGTGCAACGGGAATAGCTTCTTTT
TTAATGGTCTTGTTGGTCAGTACTTTTACCTCCGTGATGAGTCCTAAACCTCAATCGGGAACGACTCCTGTTCCTCAAAC
CTCCCAGTCAACGCCAAAGCCGCAGAATAACCAGAAGCCAGCAGCGAAGGCAACTAACAAGCCATCAGCCGCTAAATCCG
GCAGTCCTGTTTTATTAATGGCTTTGTTAGGTGGACTCACAGGATTTAGTACCACGCTTTTATTTAGTTTCCTCATCTGT
GGCCAAGTTAAACGAACCATCGAGGATTTACAAGCCCAATTTGATGCCATGTACGCCGGGGATTTTAACGTTAAAGCGAC
GATCCACTCCTCCGACGAATTAGGGCAGTTATCCCTGAGTTTTAATCAATTGGCACGGATTATTTTAACCACCACCAGTG
AAGCCCAACAACGGGCAGCCGAAACAGAACAAGCTCAAGAAGATTTAACCCGACAAGTGATCCGTCTACTTGATGATGTG
GAAGGGGCTGCGAGGGGTGATTTAACGGTAGAAGCGGTGGTGACGGCGGACGTATTAGGGGCAGTCGCCGATGCCTTTAA
CCTGACGATTCAAAACCTACGAGAAATTGTCGGACAGGTCAAGCAAGCAGCTAAACAAGTTAACAAAGGGTCAACCGATA
GTGAATCTTTTGCCCGCAATAACTCTAGTGATGCCCTACGCATGGCAGAAGAATTAGCCGTTACCCTCAATTCCGTCCAG
GTGATGACCGAATCTATCCAACGGGTGGCCGAAAATGCCCGTGAAGCCGAAGAAGTGGCGAGCGTTTCTTCGGTTACGGC
ACTCAAGGGGGGAGAAGCAGTAGAACGGACGGTAGCCGGGATTTTGGGCATCCGTGAGACCGTATCCGATACCACCCGTA
AGGTGAAACGACTCGCAGAAGCGTCTCAGGAAATCTCGAAAATTGTGGCATTAATTTCTCAAATTGCTTCTCGAACCAAT
TTACTCGCTCTCAATGCGTCAATTCAAGCAGCCAGAGCCGGAGAAGCGGGACGAGGCTTTGCCATTGTCGCTGACGAGGT
GCGCCAGTTGGCTGACCGTTCGGCGAAATCTCTAAAAGAAATTGAACAGATTGTCCTACAAATCCAAAGTGAAACGGGGT
CGGTAATGACCGCAATGGAAGAAGGCATTCAACAGGTCATTAATCTAGTGGATACCTCCGAACAAGCCAAGCGATCGCTC
GAAGATATTATTGATGTGTCTAACCGCATCAATGGTTTAGTTCGATCAATTACAGCCGATACGGTTAAACAACGGGAAAA
TTCTCGCGCGGTTACTCAGGTCATGCAGTCAGTAGAATTGACCGCTCAAGAAGCTTCCCAAGAATCCCAACGAGTAGCCG
GGTCTTTACAAACTCTGGTGGCTATTTCTCGCGATTTATTGGCTTCTGTGGAACGATTTCGTGTTGATAAGTCAGAAACT
TAA
ATGGCACCCGGCACAGATTACAGCAAGTTATATAATCAAGCGTATGTCGCCTATGGACAGGGGGAGTACGAGGAGGCAGC
CACCTTAATTGAGCCGATGGCAGAAGCCTATAGTCAAGATCCTCATGTTCTGCTCTTGCGAGGCCATATTCACTTGAGCC
TTCAGCAGTATGAAACTGCCTGTGCCGACTATCAATCAGTCCTAACCCTAACGGATCAACAAGATTTACTCAAACTAGCC
CAGCAAGGGTTAGCCCAAGCACAAGAAATGTTAGGCCAAGCTAGTCCTAACAACCTCAATCATAGCCAAAAGTCAGCGAG
TTACCTAGGTTCATCTTCCTTGAACGATGAAGATGAAGACGAAGAAGATGGACTCATTTGGCAAGACAACGAAGAAGGAG
AAGCCGACTGGGATAGTAACTTCCAAATAGATGAAAATCTTGATTGGGACTTTGATGAGGAGGATTTTGGTGAACCAACC
ATTGGCCACGACCCATCCCAAGCCAATCCCTTTGATAATGCAGGACAAACCACCTTTAGGCCTCCCCAAGCAGACGTTGC
TTCCTTAGCCGTCGAGGATGACCTCAACTTAGAAACACCGGACACTTGGCAATCTCCCTTCACCGAAGCGATGGAAGACT
TCCCCTTCACTGATGATGAGGATCTCAGAACCGAACCCCATCCGACGGCGAGTGTGGGGAAAAACACCTTTTTAGTGACT
CCTAAATTGGATAACTCAAGAGAAAATCCTGAAGGCACACCCATAGAAAGCTTTTTACGTCCATCCTCTCGGAATTTGCT
CAATTATAATTCTGATGAAGACTTGACCCTGCCACCGAGTTCTTCGAGCATGGGCAATCAGGAAAATCAGCTTGTAGAGA
ATTTAGATAGCGATCTCTCCCATCTCACGGAGATGGCGGCAGAATTACCCGATTCTGACATCTTTACCCGTAGTGCAGAG
GTCTTTAGTGACAATCTCAGTTTAGATGCCTCTGACTTGATGAGTGCTGCTCCCACTCCAACCACAGTAACTTGGGTTAA
ACCCAATGAAGCCATGGGGGGTGATCTGAGTGTTGCCTCCAATCAAGGAATTAAACCCACCGTTGAAGTCGCACAACAAG
GATGGGCAGCTTGGTTTATTAATGCTTCTTTGAAGCATAAACCCTGGATCGCAGCAGGTGCAACGGGAATAGCTTCTTTT
TTAATGGTCTTGTTGGTCAGTACTTTTACCTCCGTGATGAGTCCTAAACCTCAATCGGGAACGACTCCTGTTCCTCAAAC
CTCCCAGTCAACGCCAAAGCCGCAGAATAACCAGAAGCCAGCAGCGAAGGCAACTAACAAGCCATCAGCCGCTAAATCCG
GCAGTCCTGTTTTATTAATGGCTTTGTTAGGTGGACTCACAGGATTTAGTACCACGCTTTTATTTAGTTTCCTCATCTGT
GGCCAAGTTAAACGAACCATCGAGGATTTACAAGCCCAATTTGATGCCATGTACGCCGGGGATTTTAACGTTAAAGCGAC
GATCCACTCCTCCGACGAATTAGGGCAGTTATCCCTGAGTTTTAATCAATTGGCACGGATTATTTTAACCACCACCAGTG
AAGCCCAACAACGGGCAGCCGAAACAGAACAAGCTCAAGAAGATTTAACCCGACAAGTGATCCGTCTACTTGATGATGTG
GAAGGGGCTGCGAGGGGTGATTTAACGGTAGAAGCGGTGGTGACGGCGGACGTATTAGGGGCAGTCGCCGATGCCTTTAA
CCTGACGATTCAAAACCTACGAGAAATTGTCGGACAGGTCAAGCAAGCAGCTAAACAAGTTAACAAAGGGTCAACCGATA
GTGAATCTTTTGCCCGCAATAACTCTAGTGATGCCCTACGCATGGCAGAAGAATTAGCCGTTACCCTCAATTCCGTCCAG
GTGATGACCGAATCTATCCAACGGGTGGCCGAAAATGCCCGTGAAGCCGAAGAAGTGGCGAGCGTTTCTTCGGTTACGGC
ACTCAAGGGGGGAGAAGCAGTAGAACGGACGGTAGCCGGGATTTTGGGCATCCGTGAGACCGTATCCGATACCACCCGTA
AGGTGAAACGACTCGCAGAAGCGTCTCAGGAAATCTCGAAAATTGTGGCATTAATTTCTCAAATTGCTTCTCGAACCAAT
TTACTCGCTCTCAATGCGTCAATTCAAGCAGCCAGAGCCGGAGAAGCGGGACGAGGCTTTGCCATTGTCGCTGACGAGGT
GCGCCAGTTGGCTGACCGTTCGGCGAAATCTCTAAAAGAAATTGAACAGATTGTCCTACAAATCCAAAGTGAAACGGGGT
CGGTAATGACCGCAATGGAAGAAGGCATTCAACAGGTCATTAATCTAGTGGATACCTCCGAACAAGCCAAGCGATCGCTC
GAAGATATTATTGATGTGTCTAACCGCATCAATGGTTTAGTTCGATCAATTACAGCCGATACGGTTAAACAACGGGAAAA
TTCTCGCGCGGTTACTCAGGTCATGCAGTCAGTAGAATTGACCGCTCAAGAAGCTTCCCAAGAATCCCAACGAGTAGCCG
GGTCTTTACAAACTCTGGTGGCTATTTCTCGCGATTTATTGGCTTCTGTGGAACGATTTCGTGTTGATAAGTCAGAAACT
TAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Synechocystis sp. PCC 6803 |
53.145 |
100 |
0.557 |