Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   D9777_RS08835 Genome accession   NZ_CP033054
Coordinates   1679184..1679780 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain Bac57     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1674184..1684780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9777_RS08805 - 1674398..1674853 (+) 456 WP_014417614.1 flavodoxin -
  D9777_RS08810 dapD 1674935..1675645 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  D9777_RS08815 - 1675716..1676840 (+) 1125 WP_017417680.1 N-acetyldiaminopimelate deacetylase -
  D9777_RS08820 - 1676901..1677146 (+) 246 WP_003154596.1 YkuS family protein -
  D9777_RS08825 - 1677180..1677986 (-) 807 WP_021493755.1 mechanosensitive ion channel family protein -
  D9777_RS08830 - 1678274..1678732 (+) 459 WP_031304005.1 TlpA disulfide reductase family protein -
  D9777_RS08835 rok 1679184..1679780 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  D9777_RS08840 - 1679801..1680793 (-) 993 WP_021493753.1 hypothetical protein -
  D9777_RS08845 - 1680939..1681541 (+) 603 WP_014417620.1 molybdenum cofactor guanylyltransferase -
  D9777_RS08850 - 1681593..1682612 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  D9777_RS08855 glp 1682630..1683922 (+) 1293 WP_014417621.1 gephyrin-like molybdotransferase Glp -
  D9777_RS08860 mobB 1683883..1684404 (+) 522 WP_021493752.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=320930 D9777_RS08835 WP_003154591.1 1679184..1679780(+) (rok) [Bacillus velezensis strain Bac57]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=320930 D9777_RS08835 WP_003154591.1 1679184..1679780(+) (rok) [Bacillus velezensis strain Bac57]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTAAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment