Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   D9779_RS16205 Genome accession   NZ_CP033052
Coordinates   3117131..3119449 (-) Length   772 a.a.
NCBI ID   WP_010329907.1    Uniprot ID   -
Organism   Bacillus vallismortis strain Bac111     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3112131..3124449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9779_RS16165 - 3112594..3113025 (+) 432 WP_010329899.1 Na(+)/H(+) antiporter subunit B -
  D9779_RS16170 - 3113025..3113366 (+) 342 WP_010329900.1 Na(+)/H(+) antiporter subunit C -
  D9779_RS16175 - 3113359..3114843 (+) 1485 WP_121643186.1 Na+/H+ antiporter subunit D -
  D9779_RS16180 - 3114849..3115325 (+) 477 WP_121643187.1 Na+/H+ antiporter subunit E -
  D9779_RS16185 - 3115325..3115609 (+) 285 WP_121643188.1 Na(+)/H(+) antiporter subunit F1 -
  D9779_RS16190 mnhG 3115593..3115967 (+) 375 WP_010329904.1 monovalent cation/H(+) antiporter subunit G -
  D9779_RS16195 - 3116007..3116387 (-) 381 WP_121643189.1 hotdog fold thioesterase -
  D9779_RS16200 comA 3116406..3117050 (-) 645 WP_010329906.1 two-component system response regulator ComA Regulator
  D9779_RS16205 comP 3117131..3119449 (-) 2319 WP_010329907.1 sensor histidine kinase Regulator
  D9779_RS16210 comX 3119469..3119645 (-) 177 WP_010329908.1 competence pheromone ComX -
  D9779_RS16215 - 3119660..3120553 (-) 894 WP_240467595.1 polyprenyl synthetase family protein -
  D9779_RS16220 degQ 3120684..3120824 (-) 141 WP_121643190.1 degradation enzyme regulation protein DegQ Regulator
  D9779_RS16225 - 3121046..3121171 (+) 126 WP_121643768.1 hypothetical protein -
  D9779_RS16230 - 3121284..3121649 (+) 366 WP_121643191.1 hypothetical protein -
  D9779_RS16235 pdeH 3121628..3122857 (-) 1230 WP_121643192.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 772 a.a.        Molecular weight: 90351.81 Da        Isoelectric Point: 8.7275

>NTDB_id=320884 D9779_RS16205 WP_010329907.1 3117131..3119449(-) (comP) [Bacillus vallismortis strain Bac111]
MKNFKRNFSIVLILFSFLYFAYIVYFTQNGILVGTYVSETANHELKVEKLTKSTYGKYMGLKEGDLILEISGKKPTNENI
KRNYLAKAEHLKVKRDNHEIQLHNMEYISLNNSYSFFIYIIPCIFFALSLLCAFYIYRVNRVKNTYSAYILINFLLFISI
AYLSAGGVTRGYEVNRYINLFTFLNVPVLYLHFLYQYFKELRIKFSSRYIVNMLYMLPIINVLLVFTQKYLPSGIMTNIS
NINLVTFLVEISVVYFCIIYYGIIYRKRDHYYLLKVLLISNTVAFFPFTVLYIMPEVLFGQYIYSAIVTAPFLIIIPLAL
VYQFVVNKIYDIDFILGRIRYYSLLSIIPTIGIVWLSIIFDSKRADFNIILITLCTFIIFLSVFYIKELLDYKFRLKRFS
EKYNYQDSIFKYTQLIKGVSALDQVFKNLKTTILEVLPVSKAYIFEVGADREIIYFDKQSVEPNWRLYKTEFEKVTKETG
KIIEVNQGFLIKVGEKGTSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVVQIEELMDHLQALKREDANPVWLK
KLMYTIEEKQRSELARDLHDSVLQDLISLKRQCELFLADFKKDDNPCQEEVQDKLVQMNEQMSDVISMTRETCHELRPQL
LYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYE
DNGVGFDQEKHHEHSMSMGLSGIKERVRALDGRLRIETCEGKGFKADIEIEL

Nucleotide


Download         Length: 2319 bp        

>NTDB_id=320884 D9779_RS16205 WP_010329907.1 3117131..3119449(-) (comP) [Bacillus vallismortis strain Bac111]
TTGAAAAACTTTAAAAGAAATTTTTCTATAGTGCTAATATTATTTAGTTTCTTATATTTTGCTTATATCGTTTATTTCAC
TCAGAATGGGATTTTAGTTGGTACTTATGTTTCTGAAACAGCCAATCATGAGCTGAAAGTTGAAAAGCTGACTAAATCCA
CATATGGAAAATATATGGGCTTGAAAGAAGGAGACTTAATACTCGAGATAAGTGGGAAGAAACCTACAAACGAAAATATA
AAAAGAAATTACTTAGCGAAAGCTGAGCATTTAAAAGTAAAAAGGGATAACCATGAAATTCAATTACATAATATGGAGTA
TATCTCTTTAAATAATTCCTATAGCTTTTTCATTTATATTATCCCTTGTATATTTTTTGCATTGAGTCTGTTATGTGCAT
TTTATATTTATAGGGTCAATCGAGTGAAAAATACATACTCAGCTTATATTTTGATTAATTTTTTGCTGTTTATATCAATA
GCCTATTTAAGTGCTGGAGGCGTAACTAGAGGATATGAAGTAAATAGATATATTAATCTTTTTACCTTTTTAAATGTACC
TGTCTTGTATTTGCATTTTCTGTATCAATATTTTAAAGAATTAAGAATCAAGTTTTCATCACGTTATATCGTGAATATGT
TATACATGTTGCCGATTATCAATGTATTATTAGTGTTCACTCAGAAATATCTCCCCTCAGGAATTATGACGAATATAAGC
AATATAAATTTAGTAACATTCTTAGTAGAGATTTCGGTTGTTTATTTTTGCATTATTTATTATGGGATCATTTATAGAAA
AAGGGATCATTACTATTTGTTGAAAGTATTATTGATTTCAAATACGGTAGCCTTCTTTCCTTTTACGGTCTTATATATCA
TGCCGGAAGTTTTATTTGGGCAATATATTTATTCAGCAATAGTAACTGCGCCGTTCTTAATAATTATCCCATTAGCATTG
GTTTATCAATTCGTTGTAAATAAAATTTATGATATAGACTTTATTCTAGGCAGAATTAGATATTATAGTTTATTGTCCAT
CATTCCAACAATAGGCATAGTCTGGTTATCAATTATATTTGATAGCAAAAGAGCTGATTTTAATATCATTTTAATTACGT
TATGTACGTTCATTATTTTTCTGTCGGTCTTTTATATTAAAGAGTTATTAGATTATAAATTTCGTTTAAAACGATTTTCA
GAAAAATATAATTATCAAGACAGTATTTTTAAATATACGCAATTAATTAAAGGCGTATCAGCTTTGGATCAAGTATTTAA
GAATTTAAAGACAACAATACTAGAAGTTCTACCCGTAAGTAAAGCCTACATCTTTGAAGTTGGTGCAGATAGAGAAATCA
TTTACTTTGACAAACAGAGTGTTGAACCCAACTGGAGGCTGTATAAAACCGAATTTGAAAAGGTTACTAAAGAAACAGGA
AAGATTATTGAGGTTAATCAAGGCTTTTTGATTAAAGTAGGGGAAAAAGGTACAAGTTCTTATGTATTGCTTTGTTTATC
TAGTATCAATACACCAAGATTGACAAGAGATGAAATTTCATGGCTGAAAACATTATCGTTTTATACTAGTGTATCCATGG
AAAATGTTGTGCAAATTGAAGAACTTATGGATCACTTACAAGCTTTAAAAAGGGAGGATGCAAACCCCGTTTGGCTAAAA
AAACTCATGTACACCATCGAAGAAAAACAACGCTCTGAACTCGCTCGTGATCTCCACGATTCCGTTCTTCAGGATTTGAT
TTCATTAAAGCGCCAGTGCGAGCTGTTTTTGGCTGATTTTAAGAAGGACGATAATCCGTGCCAGGAAGAGGTGCAGGACA
AGCTTGTACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGCGGGAGACGTGTCATGAATTGCGGCCGCAGCTA
TTGTATGATCTTGGGCTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAACGGGTTCCGTTTCATATCCGTTT
AAATACCGGCAGATTTACGGCATCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTA
ATGCGGTTAAACACTCACAAGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAGATCGTTCTTCATTACGAG
GACAATGGCGTAGGATTTGATCAGGAAAAACATCATGAGCATTCCATGAGTATGGGGCTTTCTGGAATTAAAGAGAGAGT
CAGGGCTTTAGATGGACGCCTTCGGATTGAAACATGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

63.26

100

0.633


Multiple sequence alignment