Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   D9779_RS03035 Genome accession   NZ_CP033052
Coordinates   588456..589406 (+) Length   316 a.a.
NCBI ID   WP_121641892.1    Uniprot ID   -
Organism   Bacillus vallismortis strain Bac111     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 583456..594406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9779_RS03010 rapC 584854..586002 (+) 1149 WP_121641890.1 response regulator aspartate phosphatase RapC Regulator
  D9779_RS03015 phrC 585986..586108 (+) 123 WP_010330797.1 phosphatase RapC inhibitor PhrC Regulator
  D9779_RS03020 - 586206..586301 (-) 96 WP_026014550.1 YjcZ family sporulation protein -
  D9779_RS03025 - 586438..586551 (-) 114 WP_039075856.1 YjcZ family sporulation protein -
  D9779_RS03030 - 586704..588068 (-) 1365 WP_121641891.1 aspartate kinase -
  D9779_RS03035 ceuB 588456..589406 (+) 951 WP_121641892.1 petrobactin ABC transporter permease YclN Machinery gene
  D9779_RS03040 yclO 589399..590346 (+) 948 WP_010330801.1 petrobactin ABC transporter permease YclO -
  D9779_RS03045 yclP 590340..591098 (+) 759 WP_010330802.1 petrobactin ABC transporter ATP-binding protein YclP -
  D9779_RS03050 - 591120..592076 (+) 957 WP_010330803.1 siderophore ABC transporter substrate-binding protein -
  D9779_RS03055 - 592120..593538 (-) 1419 WP_121641893.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34966.35 Da        Isoelectric Point: 9.9364

>NTDB_id=320836 D9779_RS03035 WP_121641892.1 588456..589406(+) (ceuB) [Bacillus vallismortis strain Bac111]
MKLRYLFILLIILAITSVFIGVEDLSPLDLFDLSKQEASTLFSSRLPRLVSILIAGLSMSICGLIMQQISRNKFVSPTTA
GTVDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYFYADKFTVAGMGESFSVNLGLKYKRVVNIGLMIVSLITSLVILTVGM
LPFLGLIIPNIVSMYRGDNLKNSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=320836 D9779_RS03035 WP_121641892.1 588456..589406(+) (ceuB) [Bacillus vallismortis strain Bac111]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAATCACATCTGTGTTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCATCAACGCTGTTTTCAAGCCGTTTGCCGCGATTGGTCAGCATTCTTA
TCGCGGGCTTAAGCATGAGCATTTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCAACAACGGCG
GGCACGGTGGATTGGGCGAGGCTTGGCATTTTAATTTCTTTGCTGCTGTTTACATCTGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGGAATTTTCTGTTTATGAAAATTCTTGAAAGAATCAAGTTCAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCCATCGCGACATTTATCGCATATAAATATGACTTGATC
CAAAATGTGTCATCATGGCTTCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATTTCTATGCGGATAAATTTACAGTGGCCGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGAGTTGTGAACATCGGGCTCATGATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATGTACAGAGGAGACAATTTGAAGAACAGCCTGCCGCACAC
GGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGTGATATATTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment