Detailed information NTG0320834

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: D9779_RS03010
• Genome accession: NZ_CP033052
• Coordinates: 584854..586002 (+)
• Length: 382 a.a.
• NCBI ID: WP_121641890.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain Bac111
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 579854..591002

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9779_RS02990	-	580230..580910 (-)	681	WP_010330792.1	ABC transporter ATP-binding protein	-
D9779_RS02995	-	580926..582392 (-)	1467	WP_121641889.1	ABC transporter permease	-
D9779_RS03000	yclJ	582605..583288 (+)	684	WP_010330794.1	two-component system response regulator YclJ	-
D9779_RS03005	-	583275..584690 (+)	1416	WP_082246392.1	sensor histidine kinase	-
D9779_RS03010	rapC	584854..586002 (+)	1149	WP_121641890.1	response regulator aspartate phosphatase RapC	Regulator
D9779_RS03015	phrC	585986..586108 (+)	123	WP_010330797.1	phosphatase RapC inhibitor PhrC	Regulator
D9779_RS03020	-	586206..586301 (-)	96	WP_026014550.1	YjcZ family sporulation protein	-
D9779_RS03025	-	586438..586551 (-)	114	WP_039075856.1	YjcZ family sporulation protein	-
D9779_RS03030	-	586704..588068 (-)	1365	WP_121641891.1	aspartate kinase	-
D9779_RS03035	ceuB	588456..589406 (+)	951	WP_121641892.1	petrobactin ABC transporter permease YclN	Machinery gene
D9779_RS03040	yclO	589399..590346 (+)	948	WP_010330801.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45622.67 Da
• Isoelectric Point: 5.0392

>NTDB_id=320834 D9779_RS03010 WP_121641890.1 584854..586002(+) (rapC) [Bacillus vallismortis strain Bac111]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVYGVNLMDERNFEQAARHFKLALDMAEAEQKAQLVGRAYYNLGLCYYNQDLID
PAIDYFEKAVSTFESSRIINSLPQAYFLITLIYYKRGKHDKASAYHKRGYEYAKETDDADYAVKFEFLQSLYQQQPNEEG
IDRCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=320834 D9779_RS03010 WP_121641890.1 584854..586002(+) (rapC) [Bacillus vallismortis strain Bac111]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGCACATTCAGCGT
GCCGGATGCCGAAGTGTTGAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGCCACCAGCTTATGCTTGATTATCTTGAGCCGTTAGAGAAGTTAAATATCGAGGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCGGATCTCAAAGGGCTGCTCGACTATTATGTGAATTTTTT
CCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCGGCGATTACATATTATAAACAGGCGGAAAAAAAGCTATCCT
TTGTCGCAGACCATATTGAGCGTGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCACTGATTAATATAAAAAACGCCTATGAAATTTATGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTACGGGGTCAACCTGATGGATGAAAGGAATTTTGAACAAGCCGCACGCCATTTCAAATTGGCGCTCGATATGGCCG
AAGCAGAACAAAAAGCCCAGTTGGTCGGAAGGGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTATTGAC
CCTGCTATTGACTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGAATCATCAATTCACTGCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGCATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTACGCGGTAAAATTCGAGTTTTTGCAATCCCTATATCAGCAACAGCCCAATGAAGAAGGA
ATCGATCGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTCAAACTGTCTGCTTCCTACTTTTTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	97.12	100	0.971
rapF	Bacillus subtilis subsp. subtilis str. 168	56.842	99.476	0.565