Detailed information NTG0320334

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D4H18_RS05825
• Genome accession: NZ_CP032912
• Coordinates: 1182342..1183142 (-)
• Length: 266 a.a.
• NCBI ID: WP_033590117.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 13-A-EK8
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1177342..1188142

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4H18_RS05770	-	1177616..1177951 (-)	336	WP_001862999.1	hypothetical protein	-
D4H18_RS05775	-	1177941..1178727 (-)	787	Protein_1101	hypothetical protein	-
D4H18_RS05780	-	1178727..1179108 (-)	382	Protein_1102	DUF1294 domain-containing protein	-
D4H18_RS08275	-	1179406..1179831 (-)	426	WP_236636009.1	hypothetical protein	-
D4H18_RS05800	-	1180093..1180659 (-)	567	WP_139523054.1	hypothetical protein	-
D4H18_RS05805	-	1180643..1180948 (-)	306	WP_139523055.1	hypothetical protein	-
D4H18_RS05815	-	1181134..1181809 (-)	676	Protein_1106	tetratricopeptide repeat protein	-
D4H18_RS05820	dprB	1181941..1182345 (-)	405	WP_139523057.1	Holliday junction resolvase RuvX	Machinery gene
D4H18_RS05825	dprA	1182342..1183142 (-)	801	WP_033590117.1	DNA-processing protein DprA	Machinery gene
D4H18_RS05830	minE	1183149..1183382 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
D4H18_RS05835	minD	1183379..1184185 (-)	807	WP_139523058.1	septum site-determining protein MinD	-
D4H18_RS05840	ilvC	1184204..1185196 (-)	993	WP_139523059.1	ketol-acid reductoisomerase	-
D4H18_RS05850	-	1185444..1186226 (+)	783	WP_139523060.1	NAD+ synthase	-
D4H18_RS05855	-	1186223..1187161 (+)	939	WP_139523061.1	tetraacyldisaccharide 4'-kinase	-
D4H18_RS05860	pseH	1187094..1187636 (-)	543	WP_139523062.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29870.76 Da
• Isoelectric Point: 8.3845

>NTDB_id=320334 D4H18_RS05825 WP_033590117.1 1182342..1183142(-) (dprA) [Helicobacter pylori strain 13-A-EK8]
MKSNFQYSALENIPKVFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLSQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=320334 D4H18_RS05825 WP_033590117.1 1182342..1183142(-) (dprA) [Helicobacter pylori strain 13-A-EK8]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGTCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACAAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GTTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTATCTCAGCGCTTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTTTGCGAAAAACCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.345	84.962	0.402