Detailed information NTG0320190

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D4J22_RS06155
• Genome accession: NZ_CP032905
• Coordinates: 1240934..1241734 (-)
• Length: 266 a.a.
• NCBI ID: WP_139547407.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 26-A-EK1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1235934..1246734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4J22_RS06100	-	1236318..1236653 (-)	336	WP_001862999.1	hypothetical protein	-
D4J22_RS06105	-	1236643..1237429 (-)	787	Protein_1163	hypothetical protein	-
D4J22_RS06110	-	1237429..1237810 (-)	382	Protein_1164	DUF1294 domain-containing protein	-
D4J22_RS08575	-	1238108..1238533 (-)	426	WP_236636009.1	hypothetical protein	-
D4J22_RS06130	-	1238795..1239361 (-)	567	WP_139547403.1	hypothetical protein	-
D4J22_RS06135	-	1239345..1239650 (-)	306	WP_139547404.1	hypothetical protein	-
D4J22_RS06145	-	1239835..1240402 (-)	568	Protein_1168	tetratricopeptide repeat protein	-
D4J22_RS06150	dprB	1240533..1240937 (-)	405	WP_139547406.1	Holliday junction resolvase RuvX	Machinery gene
D4J22_RS06155	dprA	1240934..1241734 (-)	801	WP_139547407.1	DNA-processing protein DprA	Machinery gene
D4J22_RS06160	minE	1241741..1241974 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
D4J22_RS06165	minD	1241971..1242777 (-)	807	WP_078252647.1	septum site-determining protein MinD	-
D4J22_RS06170	ilvC	1242801..1243793 (-)	993	WP_139547408.1	ketol-acid reductoisomerase	-
D4J22_RS06180	-	1244042..1244824 (+)	783	WP_139547409.1	NAD+ synthase	-
D4J22_RS06185	-	1244821..1245759 (+)	939	WP_139547410.1	tetraacyldisaccharide 4'-kinase	-
D4J22_RS06190	pseH	1245692..1246234 (-)	543	WP_139547411.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29874.81 Da
• Isoelectric Point: 7.7999

>NTDB_id=320190 D4J22_RS06155 WP_139547407.1 1240934..1241734(-) (dprA) [Helicobacter pylori strain 26-A-EK1]
MKSHFQYSALENIPKAFDILKDPPKQLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQKGLILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=320190 D4J22_RS06155 WP_139547407.1 1240934..1241734(-) (dprA) [Helicobacter pylori strain 26-A-EK1]
ATGAAAAGCCATTTCCAATACAGCGCACTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCTCCTAAACAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCACCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATTTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCGCAAAAGGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGTAGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTCGTTTTGCCCCAGCGCTTAAACGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAATACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTTTTGGGTAAAATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.744	100	0.977
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406