Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | E6P00_RS30665 | Genome accession | NZ_CP040127 |
| Coordinates | 5946507..5947103 (-) | Length | 198 a.a. |
| NCBI ID | WP_003095839.1 | Uniprot ID | G3XD30 |
| Organism | Pseudomonas aeruginosa strain PA298 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5941507..5952103
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E6P00_RS30645 (E6P00_30645) | aroK | 5942638..5943156 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| E6P00_RS30650 (E6P00_30650) | pilQ | 5943168..5945312 (-) | 2145 | WP_019726987.1 | type 4a pilus secretin PilQ | Machinery gene |
| E6P00_RS30655 (E6P00_30655) | comL/pilP | 5945366..5945890 (-) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| E6P00_RS30660 (E6P00_30660) | pilO | 5945887..5946510 (-) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| E6P00_RS30665 (E6P00_30665) | pilN | 5946507..5947103 (-) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| E6P00_RS30670 (E6P00_30670) | pilM | 5947103..5948167 (-) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| E6P00_RS30675 (E6P00_30675) | - | 5948352..5950823 (+) | 2472 | WP_019726988.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 22213.55 Da Isoelectric Point: 10.0895
>NTDB_id=320162 E6P00_RS30665 WP_003095839.1 5946507..5947103(-) (pilN) [Pseudomonas aeruginosa strain PA298]
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK
Nucleotide
Download Length: 597 bp
>NTDB_id=320162 E6P00_RS30665 WP_003095839.1 5946507..5947103(-) (pilN) [Pseudomonas aeruginosa strain PA298]
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGCTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTGGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAAGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGCTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTGGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAAGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
41.714 |
88.384 |
0.369 |