Detailed information NTG0320145

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D4K20_RS05825
• Genome accession: NZ_CP032903
• Coordinates: 1191614..1192414 (-)
• Length: 266 a.a.
• NCBI ID: WP_139545437.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 173-A-EK1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1186614..1197414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4K20_RS05790	-	1187103..1187888 (-)	786	WP_139545434.1	hypothetical protein	-
D4K20_RS05795	-	1187888..1188212 (-)	325	Protein_1101	DUF1294 domain-containing protein	-
D4K20_RS08355	-	1188581..1188832 (-)	252	WP_198518005.1	lysozyme	-
D4K20_RS08360	-	1188835..1189041 (-)	207	WP_236634924.1	lysozyme	-
D4K20_RS05805	-	1189097..1189663 (-)	567	WP_139545435.1	hypothetical protein	-
D4K20_RS05810	-	1189647..1189952 (-)	306	WP_033590115.1	hypothetical protein	-
D4K20_RS05815	-	1190066..1190926 (-)	861	WP_139545436.1	tetratricopeptide repeat protein	-
D4K20_RS05820	dprB	1191213..1191617 (-)	405	WP_120967715.1	Holliday junction resolvase RuvX	Machinery gene
D4K20_RS05825	dprA	1191614..1192414 (-)	801	WP_139545437.1	DNA-processing protein DprA	Machinery gene
D4K20_RS05830	minE	1192421..1192654 (-)	234	WP_000051425.1	cell division topological specificity factor MinE	-
D4K20_RS05835	minD	1192651..1193457 (-)	807	WP_001019051.1	septum site-determining protein MinD	-
D4K20_RS05840	ilvC	1193481..1194473 (-)	993	WP_139545438.1	ketol-acid reductoisomerase	-
D4K20_RS05850	-	1194723..1195505 (+)	783	WP_139545439.1	NAD+ synthase	-
D4K20_RS05855	-	1195502..1196440 (+)	939	WP_139545440.1	tetraacyldisaccharide 4'-kinase	-
D4K20_RS05860	pseH	1196373..1196915 (-)	543	WP_139545441.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29960.89 Da
• Isoelectric Point: 8.7867

>NTDB_id=320145 D4K20_RS05825 WP_139545437.1 1191614..1192414(-) (dprA) [Helicobacter pylori strain 173-A-EK1]
MKSNFQYSALENIPKAFDTLKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGTVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIVQNGLILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=320145 D4K20_RS05825 WP_139545437.1 1191614..1192414(-) (dprA) [Helicobacter pylori strain 173-A-EK1]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGATACGCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCACGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGTGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGTAGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCCTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTTTGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406